Functional clusters

Information

  • Type Gene Ontology
  • Description fatty acid metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica oleracea C5 3 CH_bol_127 5 5 0.000000210925
Brassica rapa A10 3 CH_bra_93 5 5 0.000000679687
Camellia sinensis var. sinensis Chr7 3 CH_camsi_638 6 22 0.000189663
Erigeron canadensis Conyza_canadensis_scaffold:7 3 CH_eca_431 4 6 0.000534451
Brassica oleracea C5 4 CH_bol_127 5 5 0.000000210925
Brassica rapa A10 4 CH_bra_93 5 5 0.000000679687
Camellia sinensis var. sinensis Chr7 4 CH_camsi_638 6 22 0.000189663
Erigeron canadensis Conyza_canadensis_scaffold:7 4 CH_eca_431 4 6 0.000534451

Available child term results

Ontology identifier Description Number of clusters
GO:0001561 fatty acid alpha-oxidation 42
GO:0001676 long-chain fatty acid metabolic process 2
GO:0006633 fatty acid biosynthetic process 46
GO:0006635 fatty acid beta-oxidation 6
GO:0006636 unsaturated fatty acid biosynthetic process 8
GO:0010430 fatty acid omega-oxidation 4
GO:0010597 green leaf volatile biosynthetic process 8
GO:0019605 butyrate metabolic process 2
GO:0030497 fatty acid elongation 6
GO:0031998 regulation of fatty acid beta-oxidation 2
GO:0033539 fatty acid beta-oxidation using acyl-CoA dehydrogenase 2
GO:0033542 fatty acid beta-oxidation, unsaturated, even number 8
GO:0042758 long-chain fatty acid catabolic process 2
GO:0042759 long-chain fatty acid biosynthetic process 8
GO:0042760 very long-chain fatty acid catabolic process 2
GO:0042761 very long-chain fatty acid biosynthetic process 2
GO:0045723 positive regulation of fatty acid biosynthetic process 6
GO:0046459 short-chain fatty acid metabolic process 2
GO:0051791 medium-chain fatty acid metabolic process 6
GO:0080141 regulation of jasmonic acid biosynthetic process 2
GO:1902609 (R)-2-hydroxy-alpha-linolenic acid biosynthetic process 2
GO:2001280 positive regulation of unsaturated fatty acid biosynthetic process 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001