Functional clusters

Information

  • Type Gene Ontology
  • Description phospholipid biosynthetic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Sechium edule LG04 3 CH_sed_161 4 5 0.0000492833
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_357 5 20 0.000586856
Sechium edule LG04 4 CH_sed_161 4 5 0.0000492833
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_357 5 20 0.000586856

Available child term results

Ontology identifier Description Number of clusters
GO:0006506 GPI anchor biosynthetic process 14
GO:0006654 phosphatidic acid biosynthetic process 4
GO:0006656 phosphatidylcholine biosynthetic process 2
GO:0006661 phosphatidylinositol biosynthetic process 2
GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway 12
GO:0010513 positive regulation of phosphatidylinositol biosynthetic process 2
GO:0016024 CDP-diacylglycerol biosynthetic process 2
GO:0016255 attachment of GPI anchor to protein 14
GO:0032049 cardiolipin biosynthetic process 8
GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process 4
GO:0045337 farnesyl diphosphate biosynthetic process 2
GO:0046854 phosphatidylinositol phosphate biosynthetic process 2
GO:1900486 positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway 8
GO:1903730 regulation of phosphatidate phosphatase activity 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001