Functional clusters

Information

  • Type Gene Ontology
  • Description fatty acid alpha-oxidation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 3 CH_arhy_536 2 2 0.00017963
Camellia sinensis var. sinensis Chr1 3 CH_camsi_164 3 3 0.00000000315406
Capsicum annuum PGAv.1.6.scaffold1129 3 CH_can_376 2 2 0.000247831
Cicer arietinum L. Ca_LG6_v3 3 CH_car_200 2 3 0.000700425
Citrus clementina scaffold_2 3 CH_ccl_306 2 2 0.0000820311
Carpinus fangiana Cfa03 3 CH_cfa_218 2 2 0.0000757346
Carya illinoinensis Chr04 3 CH_cil_336 2 2 0.0000619828
Citrullus lanatus CG_Chr10 3 CH_cla_104 2 2 0.0000887115
Cucumis melo chr04 3 CH_cme_169 2 2 0.0000667111
Cucumis sativus L. chr3 3 CH_csa_75 3 3 0.0000000104528
Davidia involucrata GWHABJS00000014 3 CH_din_235 2 2 0.0000500125
Erigeron canadensis Conyza_canadensis_scaffold:6 3 CH_eca_38 4 6 0.0000000000203287
Gossypium hirsutum D04 3 CH_ghi_524 2 2 0.000267016
Gossypium raimondii Chr12 3 CH_gra_211 2 2 0.0000536107
Helianthus annuus HanXRQChr14 3 CH_han_164 4 9 0.000000000763221
Helianthus annuus HanXRQChr12 3 CH_han_712 2 2 0.0008115
Lactuca sativa Lsat_1_v8_lg_2 3 CH_lsa_175 3 4 0.0000000634075
Magnolia biondii Chr16 3 CH_mbi_91 4 6 0.0000000000773179
Nelumbo nucifera chr3 3 CH_nnu_186 2 2 0.0000481684
Quercus lobata CM012294 3 CH_qlo_215 4 6 0.00000000000619301
Theobroma cacao Chromosome_4 3 CH_tca_272 2 2 0.0000732386
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 4 CH_arhy_536 2 2 0.00017963
Camellia sinensis var. sinensis Chr1 4 CH_camsi_164 3 3 0.00000000315406
Capsicum annuum PGAv.1.6.scaffold1129 4 CH_can_376 2 2 0.000247831
Cicer arietinum L. Ca_LG6_v3 4 CH_car_200 2 3 0.000700425
Citrus clementina scaffold_2 4 CH_ccl_306 2 2 0.0000820311
Carpinus fangiana Cfa03 4 CH_cfa_218 2 2 0.0000757346
Carya illinoinensis Chr04 4 CH_cil_336 2 2 0.0000619828
Citrullus lanatus CG_Chr10 4 CH_cla_104 2 2 0.0000887115
Cucumis melo chr04 4 CH_cme_169 2 2 0.0000667111
Cucumis sativus L. chr3 4 CH_csa_75 3 3 0.0000000104528
Davidia involucrata GWHABJS00000014 4 CH_din_235 2 2 0.0000500125
Erigeron canadensis Conyza_canadensis_scaffold:6 4 CH_eca_38 4 6 0.0000000000203287
Gossypium hirsutum D04 4 CH_ghi_524 2 2 0.000267016
Gossypium raimondii Chr12 4 CH_gra_211 2 2 0.0000536107
Helianthus annuus HanXRQChr14 4 CH_han_164 4 9 0.000000000763221
Helianthus annuus HanXRQChr12 4 CH_han_712 2 2 0.0008115
Lactuca sativa Lsat_1_v8_lg_2 4 CH_lsa_175 3 4 0.0000000634075
Magnolia biondii Chr16 4 CH_mbi_91 4 6 0.0000000000773179
Nelumbo nucifera chr3 4 CH_nnu_186 2 2 0.0000481684
Quercus lobata CM012294 4 CH_qlo_215 4 6 0.00000000000619301
Theobroma cacao Chromosome_4 4 CH_tca_272 2 2 0.0000732386

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001