Functional clusters
Information
- Type Gene Ontology
- Description diterpenoid metabolic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Beta vulgaris | Chr8_EL10_PGA_scaffold4 | 3 | CH_bvu_67 | 3 | 3 | 0.0000000102821 |
| Carya illinoinensis | Chr09 | 3 | CH_cil_57 | 5 | 5 | 1.1072e-16 |
| Daucus carota | DCARv2_Chr4 | 3 | CH_dca_111 | 3 | 4 | 0.0000000976195 |
| Davidia involucrata | GWHABJS00000010 | 3 | CH_din_49 | 4 | 4 | 0.00000000000187655 |
| Durio zibethinus | NW_019168270.1 | 3 | CH_dzi_48 | 4 | 5 | 0.00000000000746777 |
| Lupinus albus | Lalb_Chr17 | 3 | CH_lal_238 | 2 | 2 | 0.0000524824 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 3 | CH_lsa_227 | 3 | 9 | 0.00000133126 |
| Magnolia biondii | Chr16 | 3 | CH_mbi_233 | 3 | 10 | 0.000000424498 |
| Malus domestica | Chr11 | 3 | CH_mdo_402 | 2 | 2 | 0.0000379212 |
| Olea europaea | chr6 | 3 | CH_oeu_278 | 2 | 2 | 0.000320273 |
| Punica granatum | NC_045133.1 | 3 | CH_pgr_367 | 2 | 3 | 0.000675279 |
| Rhododendron simsii | chr04 | 3 | CH_rsi_344 | 2 | 2 | 0.0000645307 |
| Selenicereus undatus | Scaffold_2055 | 3 | CH_sun_48 | 3 | 10 | 0.000000950199 |
| Trochodendron aralioides | group0 | 3 | CH_tar_272 | 2 | 2 | 0.0000600366 |
| Tripterygium wilfordii | NC_052252.1 | 3 | CH_twi_46 | 5 | 6 | 0.0000000000428222 |
| Vigna mungo | CM024073.1 | 3 | CH_vmu_66 | 3 | 4 | 0.0000000250499 |
| Beta vulgaris | Chr8_EL10_PGA_scaffold4 | 4 | CH_bvu_67 | 3 | 3 | 0.0000000102821 |
| Carya illinoinensis | Chr09 | 4 | CH_cil_57 | 5 | 5 | 1.1072e-16 |
| Daucus carota | DCARv2_Chr4 | 4 | CH_dca_111 | 3 | 4 | 0.0000000976195 |
| Davidia involucrata | GWHABJS00000010 | 4 | CH_din_49 | 4 | 4 | 0.00000000000187655 |
| Durio zibethinus | NW_019168270.1 | 4 | CH_dzi_48 | 4 | 5 | 0.00000000000746777 |
| Lupinus albus | Lalb_Chr17 | 4 | CH_lal_238 | 2 | 2 | 0.0000524824 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 4 | CH_lsa_227 | 3 | 9 | 0.00000133126 |
| Magnolia biondii | Chr16 | 4 | CH_mbi_233 | 3 | 10 | 0.000000424498 |
| Malus domestica | Chr11 | 4 | CH_mdo_402 | 2 | 2 | 0.0000379212 |
| Olea europaea | chr6 | 4 | CH_oeu_278 | 2 | 2 | 0.000320273 |
| Punica granatum | NC_045133.1 | 4 | CH_pgr_367 | 2 | 3 | 0.000675279 |
| Rhododendron simsii | chr04 | 4 | CH_rsi_344 | 2 | 2 | 0.0000645307 |
| Selenicereus undatus | Scaffold_2055 | 4 | CH_sun_48 | 3 | 10 | 0.000000950199 |
| Trochodendron aralioides | group0 | 4 | CH_tar_272 | 2 | 2 | 0.0000600366 |
| Tripterygium wilfordii | NC_052252.1 | 4 | CH_twi_46 | 5 | 6 | 0.0000000000428222 |
| Vigna mungo | CM024073.1 | 4 | CH_vmu_66 | 3 | 4 | 0.0000000250499 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0009686 | gibberellin biosynthetic process | 2 |
| GO:0010371 | regulation of gibberellin biosynthetic process | 32 |
| GO:0010372 | positive regulation of gibberellin biosynthetic process | 2 |
| GO:0016102 | diterpenoid biosynthetic process | 82 |
| GO:0033306 | phytol metabolic process | 74 |
| GO:0051502 | diterpene phytoalexin biosynthetic process | 16 |
| GO:1904964 | positive regulation of phytol biosynthetic process | 12 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |