Functional clusters
Information
- Type Gene Ontology
- Description sterol esterification
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr2 | 3 | CH_acertr_212 | 3 | 3 | 0.0000041748 |
| Acer truncatum | chr11 | 3 | CH_acertr_332 | 3 | 6 | 0.0000834012 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_6 | 3 | CH_amhyb_42 | 3 | 3 | 0.0000000425145 |
| Aquilegia oxysepala | CHR04 | 3 | CH_aox_124 | 3 | 3 | 0.00000656076 |
| Brassica carinata | ChrB01 | 3 | CH_bca_704 | 2 | 2 | 0.000213764 |
| Brassica rapa | A10 | 3 | CH_bra_119 | 3 | 4 | 0.00000316225 |
| Cannabis sativa | NC_044371.1 | 3 | CH_cansat_133 | 3 | 3 | 0.000000543303 |
| Cannabis sativa | NC_044372.1 | 3 | CH_cansat_77 | 4 | 6 | 0.00000000160498 |
| Capsicum annuum | PGAv.1.6.scaffold1186 | 3 | CH_can_157 | 3 | 5 | 0.000000102363 |
| Citrus clementina | scaffold_1 | 3 | CH_ccl_393 | 2 | 2 | 0.000492187 |
| Carpinus fangiana | Cfa08 | 3 | CH_cfa_95 | 3 | 3 | 0.0000000344157 |
| Citrullus lanatus | CG_Chr10 | 3 | CH_cla_38 | 3 | 3 | 0.0000000472204 |
| Cucumis melo | chr04 | 3 | CH_cme_35 | 4 | 4 | 0.00000000000445379 |
| Carica papaya | supercontig_12 | 3 | CH_cpa_298 | 2 | 2 | 0.000950661 |
| Chlamydomonas reinhardtii | chromosome_7 | 3 | CH_cre_18 | 4 | 10 | 0.0000000138926 |
| Cucumis sativus L. | chr3 | 3 | CH_csa_57 | 4 | 6 | 0.000000000130875 |
| Davidia involucrata | GWHABJS00000013 | 3 | CH_din_178 | 3 | 6 | 0.00000420071 |
| Durio zibethinus | NW_019167993.1 | 3 | CH_dzi_362 | 2 | 2 | 0.000973326 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 3 | CH_eca_110 | 3 | 4 | 0.0000000483236 |
| Fragaria vesca | Fvb3 | 3 | CH_fve_153 | 3 | 3 | 0.000000624692 |
| Gossypium hirsutum | A04 | 3 | CH_ghi_135 | 4 | 4 | 0.000000000174771 |
| Gossypium hirsutum | D05 | 3 | CH_ghi_136 | 4 | 4 | 0.000000000174771 |
| Glycine max | Gm08 | 3 | CH_gma_252 | 3 | 6 | 0.0000157238 |
| Glycine max | Gm18 | 3 | CH_gma_78 | 5 | 19 | 0.000000000361582 |
| Gossypium raimondii | Chr09 | 3 | CH_gra_149 | 3 | 4 | 0.000000965602 |
| Helianthus annuus | HanXRQChr05 | 3 | CH_han_38 | 6 | 7 | 6.27059e-18 |
| Lupinus albus | Lalb_Chr20 | 3 | CH_lal_140 | 3 | 4 | 0.000000925389 |
| Lonicera japonica | GWHAAZE00000008 | 3 | CH_lonja_274 | 3 | 3 | 0.000000887686 |
| Lonicera japonica | GWHAAZE00000001 | 3 | CH_lonja_275 | 3 | 3 | 0.000000887686 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 3 | CH_lsa_71 | 5 | 7 | 0.00000000000220038 |
| Malus domestica | Chr02 | 3 | CH_mdo_310 | 3 | 5 | 0.00000355821 |
| Manihot esculenta | Chromosome07 | 3 | CH_mes_130 | 4 | 4 | 0.00000000264778 |
| Manihot esculenta | Chromosome03 | 3 | CH_mes_19 | 10 | 13 | 2.2108e-27 |
| Petunia axillaris | Peaxi162Scf00235 | 3 | CH_pax_96 | 3 | 4 | 0.000000593943 |
| Punica granatum | NC_045130.1 | 3 | CH_pgr_176 | 3 | 3 | 0.00000139356 |
| Punica granatum | NC_045127.1 | 3 | CH_pgr_89 | 4 | 4 | 0.000000000418299 |
| Prunus persica | Pp04 | 3 | CH_ppe_216 | 3 | 3 | 0.000000701166 |
| Prunus persica | Pp04 | 3 | CH_ppe_217 | 3 | 3 | 0.000000701166 |
| Pisum sativum | chr1LG6 | 3 | CH_psa_317 | 2 | 2 | 0.000312981 |
| Phaseolus vulgaris | Chr06 | 3 | CH_pvu_134 | 3 | 3 | 0.000000283418 |
| Rhododendron simsii | chr06 | 3 | CH_rsi_277 | 3 | 3 | 0.00000424763 |
| Rhododendron simsii | chr02 | 3 | CH_rsi_44 | 8 | 17 | 8.65773e-19 |
| Sechium edule | LG05 | 3 | CH_sed_45 | 4 | 4 | 0.0000000000163416 |
| Solanum lycopersicum | SL4.0ch11 | 3 | CH_sly_24 | 7 | 7 | 2.55112e-21 |
| Solanum pennellii | Spenn-ch11 | 3 | CH_spe_56 | 4 | 4 | 0.0000000000184805 |
| Solanum tuberosum | ST4.03ch11 | 3 | CH_stu_65 | 5 | 5 | 0.00000000000000651799 |
| Trochodendron aralioides | group6 | 3 | CH_tar_10 | 7 | 7 | 6.33083e-21 |
| Trochodendron aralioides | group0 | 3 | CH_tar_177 | 3 | 3 | 0.00000154633 |
| Theobroma cacao | Chromosome_4 | 3 | CH_tca_222 | 3 | 4 | 0.0000117112 |
| Theobroma cacao | Chromosome_7 | 3 | CH_tca_43 | 6 | 12 | 0.000000000000131377 |
| Utricularia gibba | unitig_8 | 3 | CH_ugi_122 | 2 | 2 | 0.000492287 |
| Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_344 | 2 | 2 | 0.000557543 |
| Vigna mungo | CM024075.1 | 3 | CH_vmu_327 | 2 | 2 | 0.000969211 |
| Vitis vinifera | chr19 | 3 | CH_vvi_376 | 2 | 2 | 0.000456378 |
| Acer truncatum | chr2 | 4 | CH_acertr_212 | 3 | 3 | 0.0000041748 |
| Acer truncatum | chr11 | 4 | CH_acertr_332 | 3 | 6 | 0.0000834012 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_6 | 4 | CH_amhyb_42 | 3 | 3 | 0.0000000425145 |
| Aquilegia oxysepala | CHR04 | 4 | CH_aox_124 | 3 | 3 | 0.00000656076 |
| Brassica carinata | ChrB01 | 4 | CH_bca_704 | 2 | 2 | 0.000213764 |
| Brassica rapa | A10 | 4 | CH_bra_119 | 3 | 4 | 0.00000316225 |
| Cannabis sativa | NC_044371.1 | 4 | CH_cansat_133 | 3 | 3 | 0.000000543303 |
| Cannabis sativa | NC_044372.1 | 4 | CH_cansat_77 | 4 | 6 | 0.00000000160498 |
| Capsicum annuum | PGAv.1.6.scaffold1186 | 4 | CH_can_157 | 3 | 5 | 0.000000102363 |
| Citrus clementina | scaffold_1 | 4 | CH_ccl_393 | 2 | 2 | 0.000492187 |
| Carpinus fangiana | Cfa08 | 4 | CH_cfa_95 | 3 | 3 | 0.0000000344157 |
| Citrullus lanatus | CG_Chr10 | 4 | CH_cla_38 | 3 | 3 | 0.0000000472204 |
| Cucumis melo | chr04 | 4 | CH_cme_35 | 4 | 4 | 0.00000000000445379 |
| Carica papaya | supercontig_12 | 4 | CH_cpa_298 | 2 | 2 | 0.000950661 |
| Chlamydomonas reinhardtii | chromosome_7 | 4 | CH_cre_18 | 4 | 10 | 0.0000000138926 |
| Cucumis sativus L. | chr3 | 4 | CH_csa_57 | 4 | 6 | 0.000000000130875 |
| Davidia involucrata | GWHABJS00000013 | 4 | CH_din_178 | 3 | 6 | 0.00000420071 |
| Durio zibethinus | NW_019167993.1 | 4 | CH_dzi_362 | 2 | 2 | 0.000973326 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 4 | CH_eca_110 | 3 | 4 | 0.0000000483236 |
| Fragaria vesca | Fvb3 | 4 | CH_fve_153 | 3 | 3 | 0.000000624692 |
| Gossypium hirsutum | A04 | 4 | CH_ghi_135 | 4 | 4 | 0.000000000174771 |
| Gossypium hirsutum | D05 | 4 | CH_ghi_136 | 4 | 4 | 0.000000000174771 |
| Glycine max | Gm08 | 4 | CH_gma_252 | 3 | 6 | 0.0000157238 |
| Glycine max | Gm18 | 4 | CH_gma_78 | 5 | 19 | 0.000000000361582 |
| Gossypium raimondii | Chr09 | 4 | CH_gra_149 | 3 | 4 | 0.000000965602 |
| Helianthus annuus | HanXRQChr05 | 4 | CH_han_38 | 6 | 7 | 6.27059e-18 |
| Lupinus albus | Lalb_Chr20 | 4 | CH_lal_140 | 3 | 4 | 0.000000925389 |
| Lonicera japonica | GWHAAZE00000008 | 4 | CH_lonja_274 | 3 | 3 | 0.000000887686 |
| Lonicera japonica | GWHAAZE00000001 | 4 | CH_lonja_275 | 3 | 3 | 0.000000887686 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 4 | CH_lsa_71 | 5 | 7 | 0.00000000000220038 |
| Malus domestica | Chr02 | 4 | CH_mdo_310 | 3 | 5 | 0.00000355821 |
| Manihot esculenta | Chromosome07 | 4 | CH_mes_130 | 4 | 4 | 0.00000000264778 |
| Manihot esculenta | Chromosome03 | 4 | CH_mes_19 | 10 | 13 | 2.2108e-27 |
| Petunia axillaris | Peaxi162Scf00235 | 4 | CH_pax_96 | 3 | 4 | 0.000000593943 |
| Punica granatum | NC_045130.1 | 4 | CH_pgr_176 | 3 | 3 | 0.00000139356 |
| Punica granatum | NC_045127.1 | 4 | CH_pgr_89 | 4 | 4 | 0.000000000418299 |
| Prunus persica | Pp04 | 4 | CH_ppe_216 | 3 | 3 | 0.000000701166 |
| Prunus persica | Pp04 | 4 | CH_ppe_217 | 3 | 3 | 0.000000701166 |
| Pisum sativum | chr1LG6 | 4 | CH_psa_317 | 2 | 2 | 0.000312981 |
| Phaseolus vulgaris | Chr06 | 4 | CH_pvu_134 | 3 | 3 | 0.000000283418 |
| Rhododendron simsii | chr06 | 4 | CH_rsi_277 | 3 | 3 | 0.00000424763 |
| Rhododendron simsii | chr02 | 4 | CH_rsi_44 | 8 | 17 | 8.65773e-19 |
| Sechium edule | LG05 | 4 | CH_sed_45 | 4 | 4 | 0.0000000000163416 |
| Solanum lycopersicum | SL4.0ch11 | 4 | CH_sly_24 | 7 | 7 | 2.55112e-21 |
| Solanum pennellii | Spenn-ch11 | 4 | CH_spe_56 | 4 | 4 | 0.0000000000184805 |
| Solanum tuberosum | ST4.03ch11 | 4 | CH_stu_65 | 5 | 5 | 0.00000000000000651799 |
| Trochodendron aralioides | group6 | 4 | CH_tar_10 | 7 | 7 | 6.33083e-21 |
| Trochodendron aralioides | group0 | 4 | CH_tar_177 | 3 | 3 | 0.00000154633 |
| Theobroma cacao | Chromosome_4 | 4 | CH_tca_222 | 3 | 4 | 0.0000117112 |
| Theobroma cacao | Chromosome_7 | 4 | CH_tca_43 | 6 | 12 | 0.000000000000131377 |
| Utricularia gibba | unitig_8 | 4 | CH_ugi_122 | 2 | 2 | 0.000492287 |
| Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_344 | 2 | 2 | 0.000557543 |
| Vigna mungo | CM024075.1 | 4 | CH_vmu_327 | 2 | 2 | 0.000969211 |
| Vitis vinifera | chr19 | 4 | CH_vvi_376 | 2 | 2 | 0.000456378 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |