Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p20840 Brassica napus
A05p26130 Brassica napus
A06p11320 Brassica napus
A08p04340 Brassica napus
A08p06230 Brassica napus
A10p32190 Brassica napus
Aa31LG1G21360 Aethionema arabicum
Aa31LG3G11070 Aethionema arabicum
Aa31LG7G80 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.4068 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5146 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1052 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2511 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2513 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3165 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.576 Anthoceros agrestis
Actinidia01736 Actinidia chinensis
Actinidia01737 Actinidia chinensis
Actinidia07924 Actinidia chinensis
Actinidia15752 Actinidia chinensis
Actinidia15753 Actinidia chinensis
Ah.15g090690 Amaranthus hybridus
AL1105U10010 Arabidopsis lyrata
AL1G27400 Arabidopsis lyrata
AL1G55710 Arabidopsis lyrata
AL1G55720 Arabidopsis lyrata
AL2G11480 Arabidopsis lyrata
AL6G13540 Arabidopsis lyrata
AL8G44410 Arabidopsis lyrata
Aqoxy4G02758 Aquilegia oxysepala
Aqoxy7G00828 Aquilegia oxysepala
Aqoxy7G01239 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5IPV2R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6W7F9R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CWCJ30 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DTT4AE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KBFV5H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UV9SWK Arachis hypogaea
AT1G15310 Arabidopsis thaliana
AT1G48900 Arabidopsis thaliana
AT5G03940 Arabidopsis thaliana
AT5G49500 Arabidopsis thaliana
AT5G66970 Arabidopsis thaliana
ATR0691G124 Amborella trichopoda
ATR0751G012 Amborella trichopoda
ATR0776G078 Amborella trichopoda
Atru.chr1.2894 Acer truncatum
Atru.chr1.2899 Acer truncatum
Atru.chr2.443 Acer truncatum
Atru.chr8.1481 Acer truncatum
Atru.chr8.1482 Acer truncatum
Atru.chr9.2383 Acer truncatum
Atru.chr9.2497 Acer truncatum
Atru.chr9.2523 Acer truncatum
AUR62003494 Chenopodium quinoa
AUR62006196 Chenopodium quinoa
AUR62011509 Chenopodium quinoa
AUR62016327 Chenopodium quinoa
AUR62018463 Chenopodium quinoa
AUR62030708 Chenopodium quinoa
AUR62037024 Chenopodium quinoa
BcaB04g17379 Brassica carinata
BcaB05g21794 Brassica carinata
BcaB05g21818 Brassica carinata
BcaB05g25316 Brassica carinata
BcaC03g12972 Brassica carinata
BcaC03g12975 Brassica carinata
BcaC04g23952 Brassica carinata
BcaC05g25467 Brassica carinata
BcaC05g25468 Brassica carinata
BcaC05g27546 Brassica carinata
BcaC06g32097 Brassica carinata
BcaC07g37095 Brassica carinata
BcaC08g43088 Brassica carinata
BcaNung00121 Brassica carinata
BcaNung03481 Brassica carinata
BolC2t06127H Brassica oleracea
BolC2t10333H Brassica oleracea
BolC5t30081H Brassica oleracea
BolC5t32245H Brassica oleracea
BolC6t35487H Brassica oleracea
BolC6t37244H Brassica oleracea
BolC8t47265H Brassica oleracea
BolC9t53227H Brassica oleracea
BolC9t53228H Brassica oleracea
BolC9t60034H Brassica oleracea
BraA02t04793Z Brassica rapa
BraA03t11928Z Brassica rapa
BraA05t20990Z Brassica rapa
BraA06t23619Z Brassica rapa
BraA06t24311Z Brassica rapa
BraA08t32460Z Brassica rapa
BraA08t32626Z Brassica rapa
BraA10t45262Z Brassica rapa
C02p01620 Brassica napus
C02p42980 Brassica napus
C05p13440 Brassica napus
C05p35310 Brassica napus
C05p35330 Brassica napus
C06p03470 Brassica napus
C06p20610 Brassica napus
C08p04610 Brassica napus
C09p72990 Brassica napus
CAN.G108.30 Capsicum annuum
CAN.G311.91 Capsicum annuum
CAN.G397.64 Capsicum annuum
CAN.G407.72 Capsicum annuum
CAN.G47.21 Capsicum annuum
CANSAT56G2642 Cannabis sativa
CANSAT64G2635 Cannabis sativa
CARHR015840 Cardamine hirsuta
CARHR038890 Cardamine hirsuta
CARHR141050 Cardamine hirsuta
CARHR209330 Cardamine hirsuta
Carub.0001s1506 Capsella rubella
Carub.0001s3804 Capsella rubella
Carub.0002s0643 Capsella rubella
Carub.0006s0289 Capsella rubella
Carub.0008s0935 Capsella rubella
Ca_01051_v3 Cicer arietinum L.
Ca_09014_v3 Cicer arietinum L.
Ca_12524_v3 Cicer arietinum L.
CBR_g41454 Chara braunii
CBR_g48177 Chara braunii
Cc04_g04500 Coffea canephora
Cc06_g05970 Coffea canephora
Cc08_g10520 Coffea canephora
CDE02G0107 Ceratophyllum demersum
CDE04G0653 Ceratophyllum demersum
CDE04G2225 Ceratophyllum demersum
CDE07G0063 Ceratophyllum demersum
Cfa001952 Carpinus fangiana
Cfa009072 Carpinus fangiana
Cfa019686 Carpinus fangiana
Cfa023647 Carpinus fangiana
Ciclev10011285m.g Citrus clementina
Ciclev10025458m.g Citrus clementina
CiPaw.01G249200 Carya illinoinensis
CiPaw.02G157800 Carya illinoinensis
CiPaw.09G015300 Carya illinoinensis
CiPaw.10G010900 Carya illinoinensis
ClCG04G010090 Citrullus lanatus
ClCG07G012210 Citrullus lanatus
COL.COLO4_11914 Corchorus olitorius
COL.COLO4_12503 Corchorus olitorius
COL.COLO4_29709 Corchorus olitorius
COL.COLO4_35925 Corchorus olitorius
Cpa.g.sc167.7 Carica papaya
Cpa.g.sc5.5 Carica papaya
Cre05.g241450 Chlamydomonas reinhardtii
Cre11.g479750 Chlamydomonas reinhardtii
Cre13.g569200 Chlamydomonas reinhardtii
CsaV3_4G001950 Cucumis sativus L.
CsaV3_6G040720 Cucumis sativus L.
CSS0014332 Camellia sinensis var. sinensis
CSS0046572 Camellia sinensis var. sinensis
DCAR_020740 Daucus carota
DCAR_025520 Daucus carota
DCAR_028096 Daucus carota
DCAR_028114 Daucus carota
Dinv30617 Davidia involucrata
Dinv31698 Davidia involucrata
Dinv38131 Davidia involucrata
Duzib093G0955 Durio zibethinus
Duzib128G1904 Durio zibethinus
Duzib160G0508 Durio zibethinus
Duzib192G0646 Durio zibethinus
ECA232G4844 Erigeron canadensis
ECA247G1665 Erigeron canadensis
ECA247G2927 Erigeron canadensis
EL10Ac7g16902 Beta vulgaris
EL10Ac9g21880 Beta vulgaris
Eucgr.A02656 Eucalyptus grandis
Eucgr.C04171 Eucalyptus grandis
Eucgr.F03884 Eucalyptus grandis
Eucgr.I00867 Eucalyptus grandis
Eucgr.L02527 Eucalyptus grandis
FAN01G0865 Fragaria x ananassa
FAN01G2293 Fragaria x ananassa
FAN02G4160 Fragaria x ananassa
FAN03G0890 Fragaria x ananassa
FAN04G2160 Fragaria x ananassa
FAN05G2413 Fragaria x ananassa
FAN05G4791 Fragaria x ananassa
FAN05G5204 Fragaria x ananassa
FAN06G4522 Fragaria x ananassa
FAN08G3422 Fragaria x ananassa
FAN09G0556 Fragaria x ananassa
FAN11G3373 Fragaria x ananassa
FAN14G1841 Fragaria x ananassa
FAN14G3045 Fragaria x ananassa
FAN14G3297 Fragaria x ananassa
FAN18G2562 Fragaria x ananassa
FAN20G1566 Fragaria x ananassa
FAN21G1372 Fragaria x ananassa
FAN24G0262 Fragaria x ananassa
FAN25G1687 Fragaria x ananassa
FAN27G1035 Fragaria x ananassa
FvH4_2g33430 Fragaria vesca
FvH4_3g25380 Fragaria vesca
FvH4_5g33730 Fragaria vesca
FvH4_6g09610 Fragaria vesca
FvH4_6g19110 Fragaria vesca
FvH4_7g30801 Fragaria vesca
Glyma.03G196900 Glycine max
Glyma.07G029200 Glycine max
Glyma.08G213600 Glycine max
Glyma.13G366500 Glycine max
Glyma.15G006700 Glycine max
Glyma.19G194985 Glycine max
Gohir.A04G061900 Gossypium hirsutum
Gohir.A10G073000 Gossypium hirsutum
Gohir.D04G098700 Gossypium hirsutum
Gohir.D10G078000 Gossypium hirsutum
Gorai.009G127100 Gossypium raimondii
Gorai.009G401100 Gossypium raimondii
Gorai.011G084700 Gossypium raimondii
GSVIVG01017362001 Vitis vinifera
GSVIVG01033862001 Vitis vinifera
HanXRQChr02g0033421 Helianthus annuus
HanXRQChr04g0097901 Helianthus annuus
HanXRQChr08g0229841 Helianthus annuus
HanXRQChr17g0565601 Helianthus annuus
Haze_12107 Corylus avellana
Haze_16573 Corylus avellana
Haze_26387 Corylus avellana
Hma1.2p1_0009F.1_g006030 Hydrangea macrophylla
Hma1.2p1_0017F.1_g011200 Hydrangea macrophylla
Hma1.2p1_0102F.1_g049810 Hydrangea macrophylla
Hma1.2p1_0495F.1_g165670 Hydrangea macrophylla
HPP92_005474 Vanilla planifolia
HPP92_009892 Vanilla planifolia
Hund00511 Selenicereus undatus
Hund06551 Selenicereus undatus
Hund19917 Selenicereus undatus
Lalb_Chr04g0262351 Lupinus albus
Lalb_Chr20g0111661 Lupinus albus
Lalb_Chr25g0279251 Lupinus albus
Lalb_Chr25g0288291 Lupinus albus
Lj1g0015071 Lotus japonicus
Lj1g0026731 Lotus japonicus
Lj2A139G33 Lonicera japonica
Lj3A996G74 Lonicera japonica
Lj3A996T80 Lonicera japonica
Lj3g0007364 Lotus japonicus
Lj3g0022067 Lotus japonicus
Lj4g0008915 Lotus japonicus
Lj5C74G15 Lonicera japonica
Lj6A67G12 Lonicera japonica
Lj9A499G48 Lonicera japonica
Lj9C498T12 Lonicera japonica
Lj9C499G1 Lonicera japonica
Lsat_1_v5_gn_1_34301 Lactuca sativa
Lsat_1_v5_gn_1_74160 Lactuca sativa
Lsat_1_v5_gn_4_5341 Lactuca sativa
Lsat_1_v5_gn_4_87641 Lactuca sativa
Lsat_1_v5_gn_6_104000 Lactuca sativa
Lsat_1_v5_gn_9_20661 Lactuca sativa
Lsat_1_v5_gn_9_21981 Lactuca sativa
Manes.04G111700 Manihot esculenta
Manes.08G026300 Manihot esculenta
Manes.11G058150 Manihot esculenta
Mapoly0001s0238 Marchantia polymorpha
Mapoly0005s0040 Marchantia polymorpha
MBI04_g34134_MAGBIO Magnolia biondii
MBI04_g36309_MAGBIO Magnolia biondii
MBI05_g07845_MAGBIO Magnolia biondii
MBI11_g26443_MAGBIO Magnolia biondii
MCO01G192 Micromonas commoda
MCO13G058 Micromonas commoda
MCO16G535 Micromonas commoda
MD09G1109100 Malus domestica
MD12G1027100 Malus domestica
MD14G1027200 Malus domestica
MD17G1097300 Malus domestica
MD17G1097400 Malus domestica
MD17G1213700 Malus domestica
Medtr2g104050 Medicago truncatula
Medtr4g010050 Medicago truncatula
Medtr4g010060 Medicago truncatula
Medtr7g085470 Medicago truncatula
Medtr7g085570 Medicago truncatula
Medtr7g104890 Medicago truncatula
MELO3C017841.2 Cucumis melo
MELO3C024550.2 Cucumis melo
Migut.H01871 Erythranthe guttata
Migut.H01982 Erythranthe guttata
Migut.I00754 Erythranthe guttata
Migut.L01789 Erythranthe guttata
Migut.M01434 Erythranthe guttata
MSTRG.10373 Avicennia marina
MSTRG.11148 Avicennia marina
MSTRG.22753 Avicennia marina
MSTRG.26635 Avicennia marina
Nitab4.5_0000373g0110 Nicotiana tabacum
Nitab4.5_0000373g0140 Nicotiana tabacum
Nitab4.5_0000692g0200 Nicotiana tabacum
Nitab4.5_0001271g0100 Nicotiana tabacum
Nitab4.5_0003157g0040 Nicotiana tabacum
Nitab4.5_0003463g0040 Nicotiana tabacum
Nitab4.5_0008560g0030 Nicotiana tabacum
Nitab4.5_0009670g0050 Nicotiana tabacum
Nn2g12780 Nelumbo nucifera
Nn3g20753 Nelumbo nucifera
Nn6g34832 Nelumbo nucifera
Oeu004217.1 Olea europaea
Oeu004221.1 Olea europaea
Oeu004222.1 Olea europaea
Oeu004223.1 Olea europaea
Oeu017685.1 Olea europaea
Oeu018807.1 Olea europaea
Oeu027844.1 Olea europaea
Os01g0772800 Oryza sativa ssp. japonica
Os05g0509500 Oryza sativa ssp. japonica
Os11g0153600 Oryza sativa ssp. japonica
Os11g0153700 Oryza sativa ssp. japonica
Peaxi162Scf00021g00118 Petunia axillaris
Peaxi162Scf00105g00077 Petunia axillaris
Peaxi162Scf00105g00078 Petunia axillaris
Peaxi162Scf00332g00534 Petunia axillaris
Peaxi162Scf00404g00116 Petunia axillaris
Peaxi162Scf01093g00218 Petunia axillaris
PGR004G0555 Punica granatum
PGR004G2643 Punica granatum
PGR031G3144 Punica granatum
PGSC0003DMG400000625 Solanum tuberosum
PGSC0003DMG400008871 Solanum tuberosum
PGSC0003DMG400028629 Solanum tuberosum
Phvul.001G191200 Phaseolus vulgaris
Phvul.005G179000 Phaseolus vulgaris
Phvul.010G156800 Phaseolus vulgaris
Potri.001G253500 Populus trichocarpa
Potri.006G211500 Populus trichocarpa
Potri.009G047902 Populus trichocarpa
Potri.016G078600 Populus trichocarpa
Potri.016G112800 Populus trichocarpa
Pp3c17_5890 Physcomitrium patens
Pp3c2_2990 Physcomitrium patens
Pp3c8_7200 Physcomitrium patens
Pp3s318_20 Physcomitrium patens
Pp3s318_30 Physcomitrium patens
PRCOL_00004683 Prasinoderma coloniale
PRCOL_00006003 Prasinoderma coloniale
Prupe.3G089600 Prunus persica
Prupe.7G104500 Prunus persica
Psat3g032320 Pisum sativum
Psat7g257320 Pisum sativum
PSO063G5782 Papaver somniferum
PSO339G0273 Papaver somniferum
PSO384G2091 Papaver somniferum
PSO832G2822 Papaver somniferum
QL04p090747 Quercus lobata
QL04p090752 Quercus lobata
QL05p030676 Quercus lobata
QL07p038630 Quercus lobata
QL09p016638 Quercus lobata
RcHm_v2.0_Chr1g0352821 Rosa chinensis
RcHm_v2.0_Chr2g0088451 Rosa chinensis
RcHm_v2.0_Chr3g0474211 Rosa chinensis
RcHm_v2.0_Chr6g0309101 Rosa chinensis
Rhsim04G0099100 Rhododendron simsii
Rhsim04G0132400 Rhododendron simsii
Rhsim04G0132500 Rhododendron simsii
Rhsim08G0212200 Rhododendron simsii
Rhsim12G0190500 Rhododendron simsii
RhsimUnG0193900 Rhododendron simsii
Sabra06G0163100 Salix brachista
Sabra16G0082900 Salix brachista
Sabra16G0108500 Salix brachista
Sabra16G0154300 Salix brachista
SalBow2G1608 Salvia bowleyana
SalBow2G1755 Salvia bowleyana
Sc02g0000320 Simmondsia chinensis
Sc02g0003670 Simmondsia chinensis
Sc18g0005600 Simmondsia chinensis
Sed0001805 Sechium edule
Sed0006925 Sechium edule
Sed0014737 Sechium edule
Sed0015105 Sechium edule
Sed0016317 Sechium edule
Sed0019227 Sechium edule
Sed0027732 Sechium edule
SEGI_07976 Sequoiadendron giganteum
SEGI_09614 Sequoiadendron giganteum
SEGI_16215 Sequoiadendron giganteum
SEGI_16228 Sequoiadendron giganteum
SEGI_18285 Sequoiadendron giganteum
SEGI_21139 Sequoiadendron giganteum
SEGI_32484 Sequoiadendron giganteum
SEGI_33404 Sequoiadendron giganteum
SEGI_33964 Sequoiadendron giganteum
SGA_v2.0_scaffold35G14056 Striga asiatica
SGA_v2.0_scaffold37G14757 Striga asiatica
SGA_v2.0_scaffold5G02709 Striga asiatica
SHI12842 Sapria himalayana
SHI12843 Sapria himalayana
SHI12844 Sapria himalayana
SMO167G0026 Selaginella moellendorffii
SMO268G0011 Selaginella moellendorffii
SMO268G0032 Selaginella moellendorffii
SMO339G0068 Selaginella moellendorffii
SMO347G0203 Selaginella moellendorffii
SMO356G0221 Selaginella moellendorffii
SMO356G0244 Selaginella moellendorffii
SMO356G0570 Selaginella moellendorffii
Solyc03g116810.4 Solanum lycopersicum
Solyc09g009940.3 Solanum lycopersicum
Solyc12g042740.2 Solanum lycopersicum
Sopen03g035740 Solanum pennellii
Sopen09g004690 Solanum pennellii
Sopen12g021920 Solanum pennellii
Sp1g13630 Schrenkiella parvula
Sp1g35810 Schrenkiella parvula
Sp2g10010 Schrenkiella parvula
Sp6g38800 Schrenkiella parvula
TAR369G1154 Trochodendron aralioides
TAR623G0908 Trochodendron aralioides
TAR624G0075 Trochodendron aralioides
TAR636G2203 Trochodendron aralioides
TAR636G3220 Trochodendron aralioides
THA.LOC104800439 Tarenaya hassleriana
THA.LOC104826945 Tarenaya hassleriana
THA.LOC104827137 Tarenaya hassleriana
Thecc.05G090900 Theobroma cacao
Thecc.06G030200 Theobroma cacao
Thhalv10009400m.g Eutrema salsugineum
Thhalv10009668m.g Eutrema salsugineum
Thhalv10009795m.g Eutrema salsugineum
Thhalv10011425m.g Eutrema salsugineum
Thhalv10011882m.g Eutrema salsugineum
Thhalv10013128m.g Eutrema salsugineum
TPR.G23362 Trifolium pratense
TPR.G27500 Trifolium pratense
TPR.G33916 Trifolium pratense
TPR.G34356 Trifolium pratense
TPR.G37156 Trifolium pratense
TPR.G37269 Trifolium pratense
TPR.G38698 Trifolium pratense
TWI12G1327 Tripterygium wilfordii
TWI18G0080 Tripterygium wilfordii
TWI74G0096 Tripterygium wilfordii
unitig_0.g2767 Utricularia gibba
unitig_21.g20347 Utricularia gibba
unitig_578.g16364 Utricularia gibba
unitig_744.g24450 Utricularia gibba
unitig_744.g24451 Utricularia gibba
vmacro08868 Vaccinium macrocarpon
vmacro16724 Vaccinium macrocarpon
vmacro16880 Vaccinium macrocarpon
vmacro16882 Vaccinium macrocarpon
vmacro16883 Vaccinium macrocarpon
vmacro16884 Vaccinium macrocarpon
vmacro16887 Vaccinium macrocarpon
vmacro19006 Vaccinium macrocarpon
vmacro19007 Vaccinium macrocarpon
VMungo0331G0245 Vigna mungo
VMungo1080G0941 Vigna mungo
VMungo1383G1548 Vigna mungo
Zm00001eb151790 Zea mays
Zm00001eb197120 Zea mays
Zm00001eb292390 Zea mays
Zm00001eb370100 Zea mays
Zm00001eb406840 Zea mays

User provided reference genes

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