Gene: Pp3c17_5890
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c17_5890
- Transcript Identifier Pp3c17_5890V3.1
- Gene Type Coding gene
- Location Chr17 : 4449393-4450855 : negative
Gene Family Information
- ID HOM05D001354
- #Genes/#Species 463/100
- Phylogenetic origin
- ID ORTHO05D002582
- #Genes/#Species 277/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c17_5890V3.1
- pacid 32907120
- alias Phypa_160785
- alias Phpat.017G019700
- alias Pp1s26_93V6
- uniprot A0A2K1I9U9
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006616 | IBA | GOA Database | SRP-dependent cotranslational protein targeting to membrane, translocation | |
| GO:0006614 | IEA | GOA Database | SRP-dependent cotranslational protein targeting to membrane | |
| GO:0006614 | IEA | InterPro | SRP-dependent cotranslational protein targeting to membrane |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003924 | IBA IEA | GOA Database | GTPase activity | |
| GO:0003924 | IEA | InterPro | GTPase activity | |
| GO:0008312 | IBA IEA | GOA Database | 7S RNA binding | |
| GO:0008312 | IEA | InterPro | 7S RNA binding | |
| GO:0030942 | IBA | GOA Database | endoplasmic reticulum signal peptide binding | |
| GO:0005525 | IEA | GOA Database | GTP binding | |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048500 | IEA | GOA Database | signal recognition particle | |
| GO:0048500 | IEA | InterPro | signal recognition particle | |
| GO:0005786 | IBA | GOA Database | signal recognition particle, endoplasmic reticulum targeting | |
| GO:0005829 | IBA | GOA Database | cytosol |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004125 | Signal recognition particle, SRP54 subunit, M-domain |
| IPR000897 | Signal recognition particle, SRP54 subunit, GTPase domain |
| IPR036891 | Signal recognition particle, SRP54 subunit, M-domain superfamily |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR022941 | Signal recognition particle, SRP54 subunit |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |