Gene: Carub.0002s0643

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0002s0643
  • Transcript Identifier Carub.0002s0643.1
  • Gene Type Coding gene
  • Location scaffold_2 : 2871319-2873312 : negative

Gene Family Information

  • ID HOM05D001354
  • #Genes/#Species 463/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0002s0643.v1.1
  • pacid 39243709
  • synonym Carubv10021552m.g

Descriptions

  • Description KOG0780 - Signal recognition particle, subunit Srp54
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006614
IEA
InterProSRP-dependent cotranslational protein targeting to membrane

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008312
IEA
InterPro7S RNA binding
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
InterProGTPase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048500
IEA
InterProsignal recognition particle

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily
IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily
IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain
IPR004125 Signal recognition particle, SRP54 subunit, M-domain
IPR022941 Signal recognition particle, SRP54 subunit
Mapman id Description
23.3.1.1.5 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.component SRP54