Gene: Cc04_g04500
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc04_g04500
- Transcript Identifier Cc04_g04500.1
- Gene Type Coding gene
- Location chr4 : 3364938-3369916 : positive
Gene Family Information
- ID HOM05D001354
- #Genes/#Species 463/100
- Phylogenetic origin
- ID ORTHO05D002582
- #Genes/#Species 277/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB I1KVG2
- UniProtKB P49971
- UniProtKB F6HXF7
- UniProtKB B9RV94
- UniProtKB P49972
- UniProtKB P49967
- id GSCOCG00022175001
Descriptions
- Description Signal recognition particle 54 kDa protein 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006614 | IEA | InterPro | SRP-dependent cotranslational protein targeting to membrane |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008312 | IEA | InterPro | 7S RNA binding | |
| GO:0003924 | IEA | InterPro | GTPase activity | |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G49500 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048500 | IEA | InterPro | signal recognition particle | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G48900 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036891 | Signal recognition particle, SRP54 subunit, M-domain superfamily |
| IPR006325 | Signal recognition particle, SRP54 subunit, eukaryotic |
| IPR036225 | SRP/SRP receptor, N-terminal |
| IPR013822 | Signal recognition particle SRP54, helical bundle |
| IPR000897 | Signal recognition particle, SRP54 subunit, GTPase domain |
| IPR022941 | Signal recognition particle, SRP54 subunit |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR003593 | AAA+ ATPase domain |
| IPR042101 | Signal recognition particle SRP54, N-terminal domain superfamily |
| IPR004125 | Signal recognition particle, SRP54 subunit, M-domain |
| Mapman id | Description |
|---|---|
| 23.3.1.1.5 | Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.component SRP54 |