Gene: SGA_v2.0_scaffold35G14056
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold35G14056
- Transcript Identifier SGA_v2.0_scaffold35T14056
- Gene Type Coding gene
- Location scaffold35 : 914060-920501 : positive
Gene Family Information
- ID HOM05D001354
- #Genes/#Species 463/100
- Phylogenetic origin
- ID ORTHO05D007486
- #Genes/#Species 130/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product Signal recognition particle protein, putative
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006614 | IEA | InterPro | SRP-dependent cotranslational protein targeting to membrane | |
| GO:0045038 | ISO | PLAZA Integrative Orthology | protein import into chloroplast thylakoid membrane | AT5G03940 |
| GO:0070208 | ISO | PLAZA Integrative Orthology | protein heterotrimerization | AT5G03940 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0003924 | IEA | InterPro | GTPase activity | |
| GO:0008312 | IEA | InterPro | 7S RNA binding | |
| GO:0019904 | ISO | PLAZA Integrative Orthology | protein domain specific binding | AT5G03940 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G03940 |
| GO:0005048 | ISO | PLAZA Integrative Orthology | signal sequence binding | AT5G03940 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048500 | IEA | InterPro | signal recognition particle | |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT5G03940 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G03940 |
| GO:0080085 | ISO | PLAZA Integrative Orthology | signal recognition particle, chloroplast targeting | AT5G03940 |
| GO:0032991 | ISO | PLAZA Integrative Orthology | protein-containing complex | AT5G03940 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000897 | Signal recognition particle, SRP54 subunit, GTPase domain |
| IPR013822 | Signal recognition particle SRP54, helical bundle |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR004780 | Signal recognition particle protein |
| IPR036891 | Signal recognition particle, SRP54 subunit, M-domain superfamily |
| IPR004125 | Signal recognition particle, SRP54 subunit, M-domain |
| IPR042101 | Signal recognition particle SRP54, N-terminal domain superfamily |
| IPR022941 | Signal recognition particle, SRP54 subunit |
| IPR003593 | AAA+ ATPase domain |
| Mapman id | Description |
|---|---|
| 23.1.7.3.2 | Protein translocation.chloroplast.thylakoid membrane SRP insertion system.SRP43-SRP54 transit complex.component cpSRP54 |