Gene: Carub.0008s0935
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0008s0935
- Transcript Identifier Carub.0008s0935.1
- Gene Type Coding gene
- Location scaffold_8 : 5953414-5955763 : negative
Gene Family Information
- ID HOM05D001354
- #Genes/#Species 463/100
- Phylogenetic origin
- ID ORTHO05D002582
- #Genes/#Species 277/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0008s0935.v1.1
- pacid 39252543
- synonym Carubv10026286m.g
Descriptions
- Description K03106 - signal recognition particle subunit SRP54 (SRP54, ffh)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006614 | IEA | InterPro | SRP-dependent cotranslational protein targeting to membrane |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0008312 | IEA | InterPro | 7S RNA binding | |
| GO:0003924 | IEA | InterPro | GTPase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G49500 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048500 | IEA | InterPro | signal recognition particle |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR003593 | AAA+ ATPase domain |
| IPR013822 | Signal recognition particle SRP54, helical bundle |
| IPR000897 | Signal recognition particle, SRP54 subunit, GTPase domain |
| IPR042101 | Signal recognition particle SRP54, N-terminal domain superfamily |
| IPR036891 | Signal recognition particle, SRP54 subunit, M-domain superfamily |
| IPR004125 | Signal recognition particle, SRP54 subunit, M-domain |
| IPR006325 | Signal recognition particle, SRP54 subunit, eukaryotic |
| IPR022941 | Signal recognition particle, SRP54 subunit |
| IPR036225 | SRP/SRP receptor, N-terminal |
| Mapman id | Description |
|---|---|
| 23.3.1.1.5 | Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.component SRP54 |