Gene: Lsat_1_v5_gn_6_104000

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_6_104000
  • Transcript Identifier Lsat_1_v5_gn_6_104000.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_6 : 169660678-169661880 : positive

Gene Family Information

  • ID HOM05D001354
  • #Genes/#Species 463/100
  • Phylogenetic origin
  • ID ORTHO05D231968
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_6_104000.v5
  • pacid 38937844

Descriptions

  • Description PF02881 - SRP54-type protein, helical bundle domain (SRP54_N)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006614
IEA
InterProSRP-dependent cotranslational protein targeting to membrane

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
InterProGTPase activity
GO:0008312
ISO
PLAZA Homology (enrichment)7S RNA binding HOM05D001354

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048500
IEA
InterProsignal recognition particle

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013822 Signal recognition particle SRP54, helical bundle
IPR022941 Signal recognition particle, SRP54 subunit
IPR036225 SRP/SRP receptor, N-terminal
IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily
Mapman id Description
35.2 not assigned.not annotate