Gene: Zm00001eb151790
General Information
Structural Information
- Species Zea mays
- Gene Identifier Zm00001eb151790
- Transcript Identifier Zm00001eb151790_T001
- Gene Type Coding gene
- Location 3 : 197318941-197329864 : negative
Gene Family Information
- ID HOM05D001354
- #Genes/#Species 463/100
- Phylogenetic origin
- ID ORTHO05D002582
- #Genes/#Species 277/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Zm00001eb151790_T001
- pid Zm00001eb151790_P001
- uniprot A0A3L6FA17
- uniprot A0A1D6NAB6
- uniprot C4JC13
- uniprot B4FW12
- entrez 100502496
- refseq NM_001196974.1
- refseq NP_001183903.1
- V4_identifier Zm00001d043303
Descriptions
- Description Zm00001e019665
- Description Signal recognition particle 54 kDa protein 3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006614 | IEA | GOA Database | SRP-dependent cotranslational protein targeting to membrane | |
| GO:0006614 | IEA | InterPro | SRP-dependent cotranslational protein targeting to membrane | |
| GO:0006616 | IBA | GOA Database | SRP-dependent cotranslational protein targeting to membrane, translocation | |
| GO:0045047 | IEA | GOA Database | protein targeting to ER |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030942 | IBA | GOA Database | endoplasmic reticulum signal peptide binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G49500 |
| GO:0005525 | IEA | GOA Database | GTP binding | |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0003924 | IBA IEA | GOA Database | GTPase activity | |
| GO:0003924 | IEA | InterPro | GTPase activity | |
| GO:0008312 | IBA IEA | GOA Database | 7S RNA binding | |
| GO:0008312 | IEA | InterPro | 7S RNA binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0003723 | IEA | GOA Database | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048500 | IEA | GOA Database | signal recognition particle | |
| GO:0048500 | IEA | InterPro | signal recognition particle | |
| GO:0005786 | IBA IEA | GOA Database | signal recognition particle, endoplasmic reticulum targeting | |
| GO:0005829 | IBA | GOA Database | cytosol | |
| GO:0005737 | IEA | GOA Database | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036891 | Signal recognition particle, SRP54 subunit, M-domain superfamily |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR036225 | SRP/SRP receptor, N-terminal |
| IPR006325 | Signal recognition particle, SRP54 subunit, eukaryotic |
| IPR042101 | Signal recognition particle SRP54, N-terminal domain superfamily |
| IPR022941 | Signal recognition particle, SRP54 subunit |
| IPR003593 | AAA+ ATPase domain |
| IPR013822 | Signal recognition particle SRP54, helical bundle |
| IPR000897 | Signal recognition particle, SRP54 subunit, GTPase domain |
| Mapman id | Description |
|---|---|
| 23.3.1.1.5 | Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.component SRP54 |