Gene: Pp3c8_7200

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c8_7200
  • Transcript Identifier Pp3c8_7200V3.2
  • Gene Type Coding gene
  • Location Chr08 : 4255065-4260597 : positive

Gene Family Information

  • ID HOM05D001354
  • #Genes/#Species 463/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c8_7200V3.2
  • pacid 32964905
  • alias Phpat.008G026800
  • alias Pp1s8_116V6
  • alias Phypa_202204
  • uniprot A9RGM4

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045038
ISO
PLAZA Integrative Orthologyprotein import into chloroplast thylakoid membrane AT5G03940
GO:0070208
IEA
GOA Databaseprotein heterotrimerization
GO:0006614
IEA
GOA DatabaseSRP-dependent cotranslational protein targeting to membrane
GO:0006614
IEA
InterProSRP-dependent cotranslational protein targeting to membrane

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008312
IEA
GOA Database7S RNA binding
GO:0008312
IEA
InterPro7S RNA binding
GO:0005048
ISO
PLAZA Integrative Orthologysignal sequence binding AT5G03940
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G03940
GO:0019904
IEA
GOA Databaseprotein domain specific binding
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
GOA DatabaseGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080085
ISO
PLAZA Integrative Orthologysignal recognition particle, chloroplast targeting AT5G03940
GO:0009507
IEA
GOA Databasechloroplast
GO:0009570
IEA
GOA Databasechloroplast stroma
GO:0032991
IEA
GOA Databaseprotein-containing complex
GO:0048500
IEA
GOA Databasesignal recognition particle
GO:0048500
IEA
InterProsignal recognition particle
GO:0005786
IEA
GOA Databasesignal recognition particle, endoplasmic reticulum targeting

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain
IPR013822 Signal recognition particle SRP54, helical bundle
IPR004125 Signal recognition particle, SRP54 subunit, M-domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR022941 Signal recognition particle, SRP54 subunit
IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily
IPR003593 AAA+ ATPase domain
IPR004780 Signal recognition particle protein
IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily
Mapman id Description
23.1.7.3.2 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.SRP43-SRP54 transit complex.component cpSRP54