Gene: Sopen03g035740

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g035740
  • Transcript Identifier Sopen03g035740.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 70550330-70557602 : positive

Gene Family Information

  • ID HOM05D001354
  • #Genes/#Species 463/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g035740.1

Descriptions

  • Description Signal recognition particle, SRP54 subunit protein | FUNCTIONS IN: 7S RNA binding, mRNA binding, nucleoside-triphosphatase activity, GTP binding, nucleotide binding | INVOLVED IN: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition, SRP-dependent cotranslational protein targeting to membrane | LOCATED IN: signal recognition particle, signal recognition particle, endoplasmic reticulum targeting | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core , Signal recognition particle, SRP54 subunit, helical bundle , Signal recognition particle, SRP54 subunit, M-domain , Signal recognition particle, SRP54 subunit , Signal recognition particle, SRP54 subunit, GTPase | BEST Arabidopsis thaliana protein match is: signal recognition particle 54 kDa subunit
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006614
IEA
InterProSRP-dependent cotranslational protein targeting to membrane

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
InterProGTPase activity
GO:0008312
IEA
InterPro7S RNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G49500

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048500
IEA
InterProsignal recognition particle

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013822 Signal recognition particle SRP54, helical bundle
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily
IPR036225 SRP/SRP receptor, N-terminal
IPR022941 Signal recognition particle, SRP54 subunit
IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain
IPR004125 Signal recognition particle, SRP54 subunit, M-domain
IPR006325 Signal recognition particle, SRP54 subunit, eukaryotic
IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily
IPR003593 AAA+ ATPase domain
Mapman id Description
23.3.1.1.5 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.component SRP54