Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_6g00060 Fragaria vesca HOM05D005147 ORTHO05D006132 2.3e-232 808.5 403 100.0
FAN09G3357 Fragaria x ananassa HOM05D005147 ORTHO05D006132 5.3e-229 797.3 400 99.8
FAN02G4331 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.4e-221 772.7 395 97.7
RcHm_v2.0_Chr3g0447391 Rosa chinensis HOM05D005147 ORTHO05D006132 6.5e-203 710.7 399 89.7
FAN06G0735 Fragaria x ananassa HOM05D005147 ORTHO05D006132 2.6e-191 672.2 396 87.4
Prupe.6G365400 Prunus persica HOM05D005147 ORTHO05D006132 8.5e-179 630.6 406 79.3
FAN06G0198 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.8e-176 622.9 377 85.7
FAN10G0474 Fragaria x ananassa HOM05D005147 ORTHO05D001533 8.8e-176 620.5 405 80.0
MD00G1017100 Malus domestica HOM05D005147 ORTHO05D006132 6.5e-171 604.4 406 75.4
MD12G1261400 Malus domestica HOM05D005147 ORTHO05D006132 4.2e-170 601.7 406 75.1
CiPaw.08G111700 Carya illinoinensis HOM05D005147 ORTHO05D006132 7.0e-157 557.8 419 69.2
FvH4_7g28070 Fragaria vesca HOM05D005147 ORTHO05D001533 1.7e-155 553.1 350 83.7
Cfa006223 Carpinus fangiana HOM05D005147 ORTHO05D006132 1.2e-151 540.4 434 65.2
QL10p016598 Quercus lobata HOM05D005147 ORTHO05D006132 5.7e-151 538.1 428 65.4
CSS0016526 Camellia sinensis var. sinensis HOM05D005147 ORTHO05D006132 8.3e-150 534.3 417 64.7
Actinidia19646 Actinidia chinensis HOM05D005147 ORTHO05D006132 3.2e-149 532.3 411 66.2
Glyma.10G171500 Glycine max HOM05D005147 ORTHO05D006132 3.2e-149 532.3 429 63.2
VMungo0720G1244 Vigna mungo HOM05D005147 ORTHO05D006132 3.0e-147 525.8 429 62.9
TAR362G0740 Trochodendron aralioides HOM05D005147 ORTHO05D006132 8.6e-147 524.2 432 62.7
Phvul.007G117900 Phaseolus vulgaris HOM05D005147 ORTHO05D006132 1.1e-146 523.9 432 63.2
Lalb_Chr06g0168531 Lupinus albus HOM05D005147 ORTHO05D006132 4.3e-146 521.9 429 63.9
arahy.Tifrunner.gnm1.ann1.9U7TDI Arachis hypogaea HOM05D005147 ORTHO05D006132 1.8e-144 516.5 411 65.9
arahy.Tifrunner.gnm1.ann1.IZJM3F Arachis hypogaea HOM05D005147 ORTHO05D006132 3.1e-144 515.8 412 65.5
CsaV3_4G030880 Cucumis sativus L. HOM05D005147 ORTHO05D006132 9.8e-143 510.8 435 62.1
MELO3C008955.2 Cucumis melo HOM05D005147 ORTHO05D006132 1.3e-142 510.4 431 61.9
Ciclev10000750m.g Citrus clementina HOM05D005147 ORTHO05D006132 1.7e-142 510.0 458 60.0
TWI36G1457 Tripterygium wilfordii HOM05D005147 ORTHO05D006132 4.9e-142 508.4 464 57.5
HanXRQChr16g0511771 Helianthus annuus HOM05D005147 ORTHO05D006132 8.3e-142 507.7 409 63.1
CANSAT64G0126 Cannabis sativa HOM05D005147 ORTHO05D006132 4.1e-141 505.4 425 62.8
Lalb_Chr02g0149501 Lupinus albus HOM05D005147 ORTHO05D006132 5.4e-141 505.0 428 62.1
Gorai.003G087900 Gossypium raimondii HOM05D005147 ORTHO05D006132 7.0e-141 504.6 446 59.6
Eucgr.B01442 Eucalyptus grandis HOM05D005147 ORTHO05D006132 2.0e-140 503.1 428 61.0
Gohir.A02G107106 Gossypium hirsutum HOM05D005147 ORTHO05D006132 2.0e-140 503.1 449 59.2
Gohir.D03G072200 Gossypium hirsutum HOM05D005147 ORTHO05D006132 3.5e-140 502.3 446 59.4
DCAR_023252 Daucus carota HOM05D005147 ORTHO05D006132 7.8e-140 501.1 420 62.1
Lj5g0011670 Lotus japonicus HOM05D005147 ORTHO05D006132 7.8e-140 501.1 425 60.9
Duzib128G1295 Durio zibethinus HOM05D005147 ORTHO05D006132 2.3e-139 499.6 448 58.3
THA.LOC104820936 Tarenaya hassleriana HOM05D005147 ORTHO05D006132 3.0e-139 499.2 449 59.0
Potri.010G179000 Populus trichocarpa HOM05D005147 ORTHO05D006132 2.5e-138 496.1 475 56.2
Aa31LG11G13360 Aethionema arabicum HOM05D005147 ORTHO05D006132 3.3e-138 495.7 427 59.3
Peaxi162Scf00254g00618 Petunia axillaris HOM05D005147 ORTHO05D006132 3.3e-138 495.7 412 59.7
Rhsim05G0163700 Rhododendron simsii HOM05D005147 ORTHO05D006132 5.6e-138 495.0 415 63.1
ECA232G4784 Erigeron canadensis HOM05D005147 ORTHO05D006132 7.3e-138 494.6 420 62.6
Ah.06g195220 Amaranthus hybridus HOM05D005147 ORTHO05D006132 1.2e-137 493.8 420 60.5
ATR0743G159 Amborella trichopoda HOM05D005147 ORTHO05D006132 1.2e-137 493.8 432 58.8
Cc09_g04140 Coffea canephora HOM05D005147 ORTHO05D006132 1.6e-137 493.4 417 60.0
Sc16g0010670 Simmondsia chinensis HOM05D005147 ORTHO05D006132 3.6e-137 492.3 433 60.3
Aqoxy3G00601 Aquilegia oxysepala HOM05D005147 ORTHO05D006132 4.7e-137 491.9 430 57.9
Dinv17137 Davidia involucrata HOM05D005147 ORTHO05D006132 6.2e-137 491.5 398 63.6
Nitab4.5_0001003g0200 Nicotiana tabacum HOM05D005147 ORTHO05D006132 1.8e-136 490.0 409 61.1
Atru.chr2.212 Acer truncatum HOM05D005147 ORTHO05D006132 3.1e-136 489.2 453 58.7
Nn3g19309 Nelumbo nucifera HOM05D005147 ORTHO05D006132 3.1e-136 489.2 432 59.0
Solyc11g008700.2 Solanum lycopersicum HOM05D005147 ORTHO05D006132 3.1e-136 489.2 415 60.0
Ca_09963_v3 Cicer arietinum L. HOM05D005147 ORTHO05D006132 4.0e-136 488.8 507 52.9
Sed0015307 Sechium edule HOM05D005147 ORTHO05D006132 3.4e-135 485.7 433 58.4
PSO675G5070 Papaver somniferum HOM05D005147 ORTHO05D006132 4.4e-135 485.3 441 57.1
Os04g0496400 Oryza sativa ssp. japonica HOM05D005147 ORTHO05D006132 1.3e-134 483.8 420 59.3
PSO017G2923 Papaver somniferum HOM05D005147 ORTHO05D006132 1.3e-134 483.8 433 57.0
PGR119G0204 Punica granatum HOM05D005147 ORTHO05D006132 2.4e-133 479.6 415 61.2
AL6G27150 Arabidopsis lyrata HOM05D005147 ORTHO05D006132 4.1e-133 478.8 447 57.0
Carub.0006s1445 Capsella rubella HOM05D005147 ORTHO05D006132 5.4e-133 478.4 439 57.9
Lsat_1_v5_gn_1_127920 Lactuca sativa HOM05D005147 ORTHO05D006132 5.4e-133 478.4 407 62.7
Zm00001eb093390 Zea mays HOM05D005147 ORTHO05D006132 5.4e-133 478.4 414 59.2
Sp6g27900 Schrenkiella parvula HOM05D005147 ORTHO05D006132 9.2e-133 477.6 447 55.9
Hund07384 Selenicereus undatus HOM05D005147 ORTHO05D006132 1.2e-132 477.2 416 61.1
AT5G16260 Arabidopsis thaliana HOM05D005147 ORTHO05D006132 1.6e-132 476.9 447 56.8
BcaB08g36860 Brassica carinata HOM05D005147 ORTHO05D006132 1.0e-131 474.2 431 57.5
Manes.13G000300 Manihot esculenta HOM05D005147 ORTHO05D006132 1.3e-131 473.8 462 56.3
Sopen11g004480 Solanum pennellii HOM05D005147 ORTHO05D006132 2.3e-131 473.0 413 59.3
Zm00001eb196230 Zea mays HOM05D005147 ORTHO05D006132 1.1e-130 470.7 414 58.9
Medtr1g078210 Medicago truncatula HOM05D005147 ORTHO05D006132 1.5e-130 470.3 434 58.5
MSTRG.27416 Avicennia marina HOM05D005147 ORTHO05D006132 5.6e-130 468.4 410 58.8
BolC9t58914H Brassica oleracea HOM05D005147 ORTHO05D006132 4.7e-129 465.3 429 55.9
BcaC04g18905 Brassica carinata HOM05D005147 ORTHO05D006132 6.2e-129 464.9 428 56.1
AUR62000267 Chenopodium quinoa HOM05D005147 ORTHO05D006132 1.5e-127 460.3 444 56.5
BraA10t44347Z Brassica rapa HOM05D005147 ORTHO05D006132 2.6e-127 459.5 430 56.3
EL10Ac4g10030 Beta vulgaris HOM05D005147 ORTHO05D006132 3.4e-127 459.1 437 55.6
Sabra08G0058100 Salix brachista HOM05D005147 ORTHO05D006132 3.8e-126 455.7 552 47.6
Nitab4.5_0003928g0030 Nicotiana tabacum HOM05D005147 ORTHO05D006132 5.1e-123 445.3 403 56.6
Actinidia40010 Actinidia chinensis HOM05D005147 ORTHO05D006132 1.2e-121 440.7 398 61.1
A10p22800 Brassica napus HOM05D001331 ORTHO05D006132 2.1e-121 439.9 432 54.6
Thhalv10013396m.g Eutrema salsugineum HOM05D005147 ORTHO05D006132 2.4e-120 436.4 429 55.5
Thecc.07G106800 Theobroma cacao HOM05D005147 ORTHO05D006132 2.4e-120 436.4 409 58.9
Lj8A197T41 Lonicera japonica HOM05D005147 ORTHO05D006132 1.3e-118 430.6 507 51.1
vmacro07057 Vaccinium macrocarpon HOM05D005147 ORTHO05D006132 8.7e-115 417.9 561 46.0
unitig_747.g21462 Utricularia gibba HOM05D005147 ORTHO05D006132 9.6e-114 414.5 410 54.4
SGA_v2.0_scaffold62G21485 Striga asiatica HOM05D005147 ORTHO05D006132 1.1e-112 411.0 421 53.2
GSVIVG01007182001 Vitis vinifera HOM05D005147 ORTHO05D006132 5.8e-111 405.2 414 53.1
Psat6g051880 Pisum sativum HOM05D005147 ORTHO05D006132 4.9e-110 402.1 368 57.3
Mapoly0021s0138 Marchantia polymorpha HOM05D005147 ORTHO05D006132 6.0e-108 395.2 458 46.9
Cpa.g.sc88.4 Carica papaya HOM05D005147 ORTHO05D006132 1.1e-106 391.0 407 53.8
Sabra10G0137300 Salix brachista HOM05D005147 ORTHO05D006132 1.9e-106 390.2 571 42.0
CDE09G1177 Ceratophyllum demersum HOM05D005147 ORTHO05D006132 1.3e-105 387.5 370 56.2
AUR62006615 Chenopodium quinoa HOM05D005147 ORTHO05D006132 5.3e-104 382.1 359 57.9
SHI13696 Sapria himalayana HOM05D005147 ORTHO05D006132 1.2e-103 380.9 354 58.2
Glyma.20G218800 Glycine max HOM05D005147 ORTHO05D006132 9.3e-101 371.3 275 69.5
SMO364G0719 Selaginella moellendorffii HOM05D005147 ORTHO05D006132 2.1e-92 343.6 434 45.2
TPR.G10532 Trifolium pratense HOM05D005147 ORTHO05D006132 1.0e-91 341.3 280 66.1
Potri.008G078200 Populus trichocarpa HOM05D005147 ORTHO05D006132 3.9e-91 339.3 271 65.3
GSVIVG01003992001 Vitis vinifera HOM05D005147 ORTHO05D006132 9.7e-90 334.7 264 66.3
CARHR197050 Cardamine hirsuta HOM05D005147 ORTHO05D006132 6.3e-89 332.0 264 66.3
Pp3c20_9510 Physcomitrium patens HOM05D005147 ORTHO05D006132 5.1e-83 312.4 364 47.3
Oeu040505.2 Olea europaea HOM05D005147 ORTHO05D006132 8.7e-83 311.6 224 68.8
Zm00001eb321590 Zea mays HOM05D005147 ORTHO05D006132 1.7e-81 307.4 202 73.3
AagrBONN_evm.TU.Sc2ySwM_368.1306 Anthoceros agrestis HOM05D005147 ORTHO05D006132 5.0e-78 295.8 401 43.6
CBR_g50472 Chara braunii HOM05D005147 ORTHO05D006132 8.5e-78 295.0 337 49.3
ClCG04G001690 Citrullus lanatus HOM05D005147 ORTHO05D006132 4.1e-64 249.6 156 75.0
Actinidia05852 Actinidia chinensis HOM05D005147 ORTHO05D006132 7.7e-63 245.4 156 75.0
Nitab4.5_0000798g0160 Nicotiana tabacum HOM05D005147 ORTHO05D006132 5.5e-61 239.2 167 68.3
Zm00001eb058540 Zea mays HOM05D005147 ORTHO05D006132 5.5e-61 239.2 189 65.1
Zm00001eb092200 Zea mays HOM05D005147 ORTHO05D006132 1.1e-53 214.9 159 66.0
CBR_g19604 Chara braunii HOM05D005147 ORTHO05D006132 1.2e-52 211.5 531 30.7
Cre17.g707050 Chlamydomonas reinhardtii HOM05D005147 ORTHO05D006132 8.3e-49 198.7 492 31.5
MCO16G453 Micromonas commoda HOM05D005147 ORTHO05D006132 2.7e-47 193.7 188 56.4
Nitab4.5_0015042g0010 Nicotiana tabacum HOM05D005147 ORTHO05D006132 6.5e-46 189.1 168 57.1
Haze_04614 Corylus avellana HOM05D005147 ORTHO05D006132 6.8e-43 179.1 151 56.3
HPP92_011449 Vanilla planifolia HOM05D005147 ORTHO05D006132 1.1e-40 171.8 120 70.0
MBI07_g33483_MAGBIO Magnolia biondii HOM05D005147 ORTHO05D006132 2.7e-39 167.2 164 51.2
ClCG04G001680 Citrullus lanatus HOM05D005147 ORTHO05D006132 3.5e-39 166.8 143 58.7
SEGI_04471 Sequoiadendron giganteum HOM05D005147 ORTHO05D006132 4.3e-37 159.8 115 70.4
Cc06_g17710 Coffea canephora HOM05D005147 ORTHO05D006132 1.3e-33 148.3 274 37.6
HPP92_011450 Vanilla planifolia HOM05D005147 ORTHO05D006132 2.2e-33 147.5 237 38.8
Migut.F02088 Erythranthe guttata HOM05D005147 ORTHO05D006132 3.6e-28 130.2 135 50.4
PRCOL_00001696 Prasinoderma coloniale HOM05D005147 ORTHO05D006132 3.6e-28 130.2 430 30.0
FAN16G1629 Fragaria x ananassa HOM05D000071 ORTHO05D006132 2.3e-27 127.5 74 82.4
FAN17G2636 Fragaria x ananassa HOM05D005147 ORTHO05D006132 5.2e-27 126.3 74 79.7
Haze_04615 Corylus avellana HOM05D005147 ORTHO05D006132 1.5e-26 124.8 81 76.5
FAN03G2245 Fragaria x ananassa HOM05D005147 ORTHO05D006132 2.6e-26 124.0 74 81.1
Cfa026444 Carpinus fangiana HOM05D005147 ORTHO05D006132 3.7e-25 120.2 374 29.9
Hma1.2p1_1029F.1_g249580 Hydrangea macrophylla HOM05D005147 ORTHO05D006132 5.2e-19 99.8 246 31.7
Hma1.2p1_3112F.1_g332769 Hydrangea macrophylla HOM05D005147 ORTHO05D006132 5.2e-19 99.8 246 31.7
SHI13697 Sapria himalayana HOM05D005147 ORTHO05D000014 1.5e-18 98.2 61 63.9
Migut.F02087 Erythranthe guttata HOM05D005147 ORTHO05D006132 3.3e-13 80.5 47 76.6
Atru.chr10.460 Acer truncatum HOM05D005147 ORTHO05D006132 7.3e-13 79.3 47 76.6
SEGI_33004 Sequoiadendron giganteum HOM05D005147 ORTHO05D006132 1.4e-11 75.1 58 58.6
CDE09G1068 Ceratophyllum demersum HOM05D005147 ORTHO05D006132 1.9e-08 64.7 41 73.2
Cre07.g328400 Chlamydomonas reinhardtii HOM05D005264 ORTHO05D005428 7.1e-08 62.8 71 42.3
AagrBONN_evm.TU.Sc2ySwM_344.985 Anthoceros agrestis HOM05D005264 ORTHO05D005428 6.0e-07 59.7 99 32.3
SHI04181 Sapria himalayana HOM05D005264 ORTHO05D005428 6.0e-07 59.7 97 38.1
Ciclev10031922m.g Citrus clementina HOM05D005264 ORTHO05D005428 5.1e-06 56.6 67 43.3
CANSAT54G0937 Cannabis sativa HOM05D005264 ORTHO05D005428 6.6e-06 56.2 67 41.8
CiPaw.05G167900 Carya illinoinensis HOM05D005264 ORTHO05D005428 6.6e-06 56.2 67 40.3
Cc11_g02330 Coffea canephora HOM05D005264 ORTHO05D005428 6.6e-06 56.2 67 43.3
Peaxi162Scf00760g00024 Petunia axillaris HOM05D005264 ORTHO05D005428 6.6e-06 56.2 68 42.6
Sc10g0006820 Simmondsia chinensis HOM05D005264 ORTHO05D005428 6.6e-06 56.2 67 41.8
Nitab4.5_0002113g0070 Nicotiana tabacum HOM05D005264 ORTHO05D005428 8.7e-06 55.8 68 42.6
Nitab4.5_0007261g0060 Nicotiana tabacum HOM05D005264 ORTHO05D005428 8.7e-06 55.8 68 42.6
Solyc11g040050.3 Solanum lycopersicum HOM05D005264 ORTHO05D005428 8.7e-06 55.8 68 42.6
Sopen11g017230 Solanum pennellii HOM05D005264 ORTHO05D005428 8.7e-06 55.8 68 42.6
PGSC0003DMG400018999 Solanum tuberosum HOM05D005264 ORTHO05D005428 8.7e-06 55.8 68 42.6


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