Gene: CSS0016526
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0016526
- Transcript Identifier CSS0016526.1
- Gene Type Coding gene
- Location Chr13 : 73649175-73660355 : negative
Gene Family Information
- ID HOM05D005147
- #Genes/#Species 146/96
- Phylogenetic origin
- ID ORTHO05D006132
- #Genes/#Species 147/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid CSS0016526.1
Descriptions
- Description PREDICTED: splicing factor U2AF-associated protein 2 isoform X2 [Sesamum indicum]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000398 | IEA | InterPro | mRNA splicing, via spliceosome | |
GO:0000184 | ISO | PLAZA Integrative Orthology | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | AT5G16260 |
GO:0009910 | ISO | PLAZA Integrative Orthology | negative regulation of flower development | AT5G16260 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G16260 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G16260 |
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G16260 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR003954 | RNA recognition motif domain, eukaryote |
IPR035979 | RNA-binding domain superfamily |
IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
IPR034393 | TatSF1-like |
IPR000504 | RNA recognition motif domain |
IPR035445 | GYF-like domain superfamily |
IPR034392 | TatSF1-like, RNA recognition motif 1 |
IPR025640 | GYF domain 2 |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |