Gene: Cc06_g17710
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc06_g17710
- Transcript Identifier Cc06_g17710.1
- Gene Type Coding gene
- Location chr6 : 17878386-17881010 : negative
Gene Family Information
- ID HOM05D005147
- #Genes/#Species 146/96
- Phylogenetic origin
- ID ORTHO05D006132
- #Genes/#Species 147/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB I1LBW4
- UniProtKB E6NU39
- UniProtKB B9RH81
- id GSCOCG00040359001
Descriptions
- Description Putative RNA binding (RRM/RBD/RNP motifs) family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000184 | ISO | PLAZA Integrative Orthology | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | AT5G16260 |
| GO:0009910 | ISO | PLAZA Integrative Orthology | negative regulation of flower development | AT5G16260 |
| GO:0000398 | ISO | PLAZA Homology (enrichment) | mRNA splicing, via spliceosome | HOM05D005147 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D005147 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G16260 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G16260 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G16260 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |