Gene: SGA_v2.0_scaffold62G21485

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold62G21485
  • Transcript Identifier SGA_v2.0_scaffold62T21485
  • Gene Type Coding gene
  • Location scaffold62 : 1109718-1128870 : positive

Gene Family Information

  • ID HOM05D005147
  • #Genes/#Species 146/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Splicing factor U2AF-associated protein, putative
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007062
IEA
InterProsister chromatid cohesion
GO:0000184
ISO
PLAZA Integrative Orthologynuclear-transcribed mRNA catabolic process, nonsense-mediated decay AT5G16260
GO:0009910
ISO
PLAZA Integrative Orthologynegative regulation of flower development AT5G16260
GO:0000398
ISO
PLAZA Homology (enrichment)mRNA splicing, via spliceosome HOM05D005147

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G16260

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008278
IEA
InterProcohesin complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G16260
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G16260

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035445 GYF-like domain superfamily
IPR006910 Rad21/Rec8-like protein, N-terminal
IPR035979 RNA-binding domain superfamily
IPR039781 Rad21/Rec8-like protein
IPR000504 RNA recognition motif domain
IPR025640 GYF domain 2
IPR003954 RNA recognition motif domain, eukaryote
Mapman id Description
13.3.4.1.3 Cell cycle organisation.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.mitotic-specific Kleisin-type component SCC1