Gene: Pp3c20_9510

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c20_9510
  • Transcript Identifier Pp3c20_9510V3.3
  • Gene Type Coding gene
  • Location Chr20 : 5767521-5771364 : positive

Gene Family Information

  • ID HOM05D005147
  • #Genes/#Species 146/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c20_9510V3.3
  • pacid 32947890
  • alias Pp1s9_474V6
  • alias Phypa_50799
  • alias Phpat.020G039400
  • uniprot A0A2K1IUR9

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0009910
IEA
GOA Databasenegative regulation of flower development
GO:0000184
IEA
GOA Databasenuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IBA
IEA
GOA DatabaseRNA binding
GO:0003729
IEA
GOA DatabasemRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005686
IBA
GOA DatabaseU2 snRNP
GO:0005684
IBA
GOA DatabaseU2-type spliceosomal complex
GO:0005829
IEA
GOA Databasecytosol
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034392 TatSF1-like, RNA recognition motif 1
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
IPR034393 TatSF1-like
IPR035979 RNA-binding domain superfamily
Mapman id Description
35.1 not assigned.annotated