Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023252 Daucus carota HOM05D005147 ORTHO05D006132 1.2e-275 952.6 492 100.0
HanXRQChr16g0511771 Helianthus annuus HOM05D005147 ORTHO05D006132 2.0e-190 669.5 474 71.9
CSS0016526 Camellia sinensis var. sinensis HOM05D005147 ORTHO05D006132 8.2e-184 647.5 480 68.8
Actinidia19646 Actinidia chinensis HOM05D005147 ORTHO05D006132 5.9e-182 641.3 487 67.6
Cfa006223 Carpinus fangiana HOM05D005147 ORTHO05D006132 5.5e-180 634.8 514 65.4
TAR362G0740 Trochodendron aralioides HOM05D005147 ORTHO05D006132 4.7e-179 631.7 487 67.4
Dinv17137 Davidia involucrata HOM05D005147 ORTHO05D006132 1.0e-178 630.6 436 72.9
CiPaw.08G111700 Carya illinoinensis HOM05D005147 ORTHO05D006132 1.4e-178 630.2 513 64.3
Lsat_1_v5_gn_1_127920 Lactuca sativa HOM05D005147 ORTHO05D006132 1.3e-176 623.6 476 67.4
Atru.chr2.212 Acer truncatum HOM05D005147 ORTHO05D006132 8.2e-176 620.9 531 61.4
ECA232G4784 Erigeron canadensis HOM05D005147 ORTHO05D006132 1.4e-175 620.2 471 67.9
QL10p016598 Quercus lobata HOM05D005147 ORTHO05D006132 1.8e-175 619.8 516 63.2
VMungo0720G1244 Vigna mungo HOM05D005147 ORTHO05D006132 6.5e-173 611.3 488 63.7
arahy.Tifrunner.gnm1.ann1.IZJM3F Arachis hypogaea HOM05D005147 ORTHO05D006132 2.5e-172 609.4 479 64.7
Glyma.10G171500 Glycine max HOM05D005147 ORTHO05D006132 2.5e-172 609.4 485 64.3
arahy.Tifrunner.gnm1.ann1.9U7TDI Arachis hypogaea HOM05D005147 ORTHO05D006132 5.5e-172 608.2 479 64.7
Lj5g0011670 Lotus japonicus HOM05D005147 ORTHO05D006132 6.1e-171 604.7 506 63.0
Cc09_g04140 Coffea canephora HOM05D005147 ORTHO05D006132 6.7e-170 601.3 485 63.7
Phvul.007G117900 Phaseolus vulgaris HOM05D005147 ORTHO05D006132 8.8e-170 600.9 491 61.9
MELO3C008955.2 Cucumis melo HOM05D005147 ORTHO05D006132 2.0e-169 599.7 500 63.2
Prupe.6G365400 Prunus persica HOM05D005147 ORTHO05D006132 2.6e-169 599.4 484 64.3
Duzib128G1295 Durio zibethinus HOM05D005147 ORTHO05D006132 3.3e-169 599.0 519 60.9
Nn3g19309 Nelumbo nucifera HOM05D005147 ORTHO05D006132 3.3e-169 599.0 486 64.4
PSO675G5070 Papaver somniferum HOM05D005147 ORTHO05D006132 5.7e-169 598.2 501 62.3
RcHm_v2.0_Chr3g0447391 Rosa chinensis HOM05D005147 ORTHO05D006132 9.7e-169 597.4 480 64.6
PSO017G2923 Papaver somniferum HOM05D005147 ORTHO05D006132 2.2e-168 596.3 490 62.9
CsaV3_4G030880 Cucumis sativus L. HOM05D005147 ORTHO05D006132 8.3e-168 594.3 500 63.0
Gorai.003G087900 Gossypium raimondii HOM05D005147 ORTHO05D006132 1.1e-167 594.0 511 61.4
Ah.06g195220 Amaranthus hybridus HOM05D005147 ORTHO05D006132 1.4e-167 593.6 469 64.0
Gohir.A02G107106 Gossypium hirsutum HOM05D005147 ORTHO05D006132 1.4e-167 593.6 514 61.3
CANSAT64G0126 Cannabis sativa HOM05D005147 ORTHO05D006132 4.1e-167 592.0 510 62.5
Lj8A197T41 Lonicera japonica HOM05D005147 ORTHO05D006132 4.1e-167 592.0 576 58.7
TWI36G1457 Tripterygium wilfordii HOM05D005147 ORTHO05D006132 7.0e-167 591.3 517 60.7
Gohir.D03G072200 Gossypium hirsutum HOM05D005147 ORTHO05D006132 1.2e-166 590.5 523 60.0
FAN09G3357 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.6e-166 590.1 480 63.1
MD12G1261400 Malus domestica HOM05D005147 ORTHO05D006132 2.0e-166 589.7 485 62.7
Lalb_Chr06g0168531 Lupinus albus HOM05D005147 ORTHO05D006132 2.7e-166 589.3 495 61.8
Aqoxy3G00601 Aquilegia oxysepala HOM05D005147 ORTHO05D006132 5.9e-166 588.2 472 63.1
Lalb_Chr02g0149501 Lupinus albus HOM05D005147 ORTHO05D006132 7.7e-166 587.8 486 62.8
Sc16g0010670 Simmondsia chinensis HOM05D005147 ORTHO05D006132 1.0e-165 587.4 520 61.7
MD00G1017100 Malus domestica HOM05D005147 ORTHO05D006132 1.3e-165 587.0 485 62.5
Nitab4.5_0001003g0200 Nicotiana tabacum HOM05D005147 ORTHO05D006132 6.5e-165 584.7 508 58.9
FAN02G4331 Fragaria x ananassa HOM05D005147 ORTHO05D006132 8.5e-165 584.3 474 63.3
Solyc11g008700.2 Solanum lycopersicum HOM05D005147 ORTHO05D006132 8.5e-165 584.3 488 60.9
PGR119G0204 Punica granatum HOM05D005147 ORTHO05D006132 7.2e-164 581.3 486 62.1
MSTRG.27416 Avicennia marina HOM05D005147 ORTHO05D006132 2.1e-163 579.7 468 63.7
Potri.010G179000 Populus trichocarpa HOM05D005147 ORTHO05D006132 2.7e-163 579.3 534 58.8
Ca_09963_v3 Cicer arietinum L. HOM05D005147 ORTHO05D006132 4.7e-163 578.6 578 55.0
Sed0015307 Sechium edule HOM05D005147 ORTHO05D006132 1.8e-162 576.6 500 60.8
Manes.13G000300 Manihot esculenta HOM05D005147 ORTHO05D006132 2.3e-162 576.2 553 57.1
ATR0743G159 Amborella trichopoda HOM05D005147 ORTHO05D006132 4.0e-162 575.5 500 58.8
AUR62000267 Chenopodium quinoa HOM05D005147 ORTHO05D006132 4.0e-162 575.5 492 62.0
Sopen11g004480 Solanum pennellii HOM05D005147 ORTHO05D006132 2.0e-161 573.2 486 60.7
Hund07384 Selenicereus undatus HOM05D005147 ORTHO05D006132 3.4e-161 572.4 496 60.9
Peaxi162Scf00254g00618 Petunia axillaris HOM05D005147 ORTHO05D006132 5.7e-161 571.6 476 60.7
Medtr1g078210 Medicago truncatula HOM05D005147 ORTHO05D006132 7.5e-161 571.2 488 62.1
Os04g0496400 Oryza sativa ssp. japonica HOM05D005147 ORTHO05D006132 4.8e-160 568.5 469 60.8
Eucgr.B01442 Eucalyptus grandis HOM05D005147 ORTHO05D006132 4.1e-159 565.5 452 65.5
THA.LOC104820936 Tarenaya hassleriana HOM05D005147 ORTHO05D006132 1.7e-157 560.1 533 57.0
Zm00001eb196230 Zea mays HOM05D005147 ORTHO05D006132 3.8e-157 558.9 467 61.9
Zm00001eb093390 Zea mays HOM05D005147 ORTHO05D006132 1.1e-156 557.4 468 61.3
Aa31LG11G13360 Aethionema arabicum HOM05D005147 ORTHO05D006132 1.2e-155 553.9 492 58.7
AL6G27150 Arabidopsis lyrata HOM05D005147 ORTHO05D006132 2.3e-154 549.7 506 57.5
Carub.0006s1445 Capsella rubella HOM05D005147 ORTHO05D006132 4.0e-154 548.9 498 58.0
AT5G16260 Arabidopsis thaliana HOM05D005147 ORTHO05D006132 2.6e-153 546.2 505 57.4
Ciclev10000750m.g Citrus clementina HOM05D005147 ORTHO05D006132 1.3e-152 543.9 514 58.2
Nitab4.5_0003928g0030 Nicotiana tabacum HOM05D005147 ORTHO05D006132 2.2e-152 543.1 463 59.4
Rhsim05G0163700 Rhododendron simsii HOM05D005147 ORTHO05D006132 3.5e-150 535.8 419 67.1
Sp6g27900 Schrenkiella parvula HOM05D005147 ORTHO05D006132 1.7e-149 533.5 516 55.6
Thecc.07G106800 Theobroma cacao HOM05D005147 ORTHO05D006132 2.3e-149 533.1 464 61.9
Sabra08G0058100 Salix brachista HOM05D005147 ORTHO05D006132 5.0e-149 531.9 628 50.3
BcaB08g36860 Brassica carinata HOM05D005147 ORTHO05D006132 8.6e-149 531.2 499 55.5
FAN06G0735 Fragaria x ananassa HOM05D005147 ORTHO05D006132 2.3e-146 523.1 507 57.8
BcaC04g18905 Brassica carinata HOM05D005147 ORTHO05D006132 2.0e-145 520.0 512 53.7
BolC9t58914H Brassica oleracea HOM05D005147 ORTHO05D006132 2.0e-145 520.0 512 53.7
BraA10t44347Z Brassica rapa HOM05D005147 ORTHO05D006132 1.3e-144 517.3 520 53.3
unitig_747.g21462 Utricularia gibba HOM05D005147 ORTHO05D006132 6.4e-144 515.0 464 59.7
SGA_v2.0_scaffold62G21485 Striga asiatica HOM05D005147 ORTHO05D006132 9.2e-143 511.1 470 58.5
EL10Ac4g10030 Beta vulgaris HOM05D005147 ORTHO05D006132 9.5e-140 501.1 512 54.5
FvH4_6g00060 Fragaria vesca HOM05D005147 ORTHO05D006132 6.2e-139 498.4 420 62.1
GSVIVG01007182001 Vitis vinifera HOM05D005147 ORTHO05D006132 1.2e-137 494.2 488 55.5
FAN06G0198 Fragaria x ananassa HOM05D005147 ORTHO05D006132 3.9e-133 479.2 499 54.5
Sabra10G0137300 Salix brachista HOM05D005147 ORTHO05D006132 8.6e-133 478.0 644 47.0
Thhalv10013396m.g Eutrema salsugineum HOM05D005147 ORTHO05D006132 4.3e-132 475.7 518 51.4
FvH4_7g28070 Fragaria vesca HOM05D005147 ORTHO05D001533 2.6e-129 466.5 414 61.1
Mapoly0021s0138 Marchantia polymorpha HOM05D005147 ORTHO05D006132 1.3e-128 464.2 522 48.1
Actinidia40010 Actinidia chinensis HOM05D005147 ORTHO05D006132 1.3e-125 454.1 385 63.9
Glyma.20G218800 Glycine max HOM05D005147 ORTHO05D006132 1.8e-122 443.7 325 68.9
vmacro07057 Vaccinium macrocarpon HOM05D005147 ORTHO05D006132 1.5e-121 440.7 585 46.8
GSVIVG01003992001 Vitis vinifera HOM05D005147 ORTHO05D006132 4.6e-118 429.1 305 69.5
TPR.G10532 Trifolium pratense HOM05D005147 ORTHO05D006132 6.0e-118 428.7 333 67.3
SHI13696 Sapria himalayana HOM05D005147 ORTHO05D006132 1.9e-116 423.7 383 59.3
SMO364G0719 Selaginella moellendorffii HOM05D005147 ORTHO05D006132 3.4e-113 412.9 488 46.1
Potri.008G078200 Populus trichocarpa HOM05D005147 ORTHO05D006132 1.7e-112 410.6 314 67.5
A10p22800 Brassica napus HOM05D001331 ORTHO05D006132 6.4e-112 408.7 472 48.5
Psat6g051880 Pisum sativum HOM05D005147 ORTHO05D006132 8.4e-112 408.3 383 57.2
FAN10G0474 Fragaria x ananassa HOM05D005147 ORTHO05D001533 4.2e-111 406.0 435 53.3
Oeu040505.2 Olea europaea HOM05D005147 ORTHO05D006132 3.0e-109 399.8 279 71.0
AUR62006615 Chenopodium quinoa HOM05D005147 ORTHO05D006132 1.5e-105 387.5 388 56.7
CARHR197050 Cardamine hirsuta HOM05D005147 ORTHO05D006132 2.6e-105 386.7 320 62.2
CDE09G1177 Ceratophyllum demersum HOM05D005147 ORTHO05D006132 4.9e-104 382.5 357 58.8
Cpa.g.sc88.4 Carica papaya HOM05D005147 ORTHO05D006132 7.1e-103 378.6 406 54.2
Pp3c20_9510 Physcomitrium patens HOM05D005147 ORTHO05D006132 2.7e-102 376.7 432 48.4
AagrBONN_evm.TU.Sc2ySwM_368.1306 Anthoceros agrestis HOM05D005147 ORTHO05D006132 1.2e-94 351.3 467 45.0
CBR_g50472 Chara braunii HOM05D005147 ORTHO05D006132 1.1e-92 344.7 681 35.4
ClCG04G001690 Citrullus lanatus HOM05D005147 ORTHO05D006132 1.5e-92 344.4 216 76.4
Actinidia05852 Actinidia chinensis HOM05D005147 ORTHO05D006132 2.1e-91 340.5 215 75.8
Zm00001eb321590 Zea mays HOM05D005147 ORTHO05D006132 3.2e-87 326.6 214 72.9
Nitab4.5_0000798g0160 Nicotiana tabacum HOM05D005147 ORTHO05D006132 9.0e-82 308.5 241 63.5
HPP92_011449 Vanilla planifolia HOM05D005147 ORTHO05D006132 5.9e-65 252.7 183 68.3
Cre17.g707050 Chlamydomonas reinhardtii HOM05D005147 ORTHO05D006132 1.1e-63 248.4 545 33.9
CBR_g19604 Chara braunii HOM05D005147 ORTHO05D006132 5.5e-63 246.1 552 34.6
MCO16G453 Micromonas commoda HOM05D005147 ORTHO05D006132 7.4e-60 235.7 244 53.3
Zm00001eb058540 Zea mays HOM05D005147 ORTHO05D006132 3.1e-58 230.3 208 59.1
Zm00001eb092200 Zea mays HOM05D005147 ORTHO05D006132 1.1e-55 221.9 159 67.9
Haze_04614 Corylus avellana HOM05D005147 ORTHO05D006132 1.0e-48 198.7 151 65.6
Nitab4.5_0015042g0010 Nicotiana tabacum HOM05D005147 ORTHO05D006132 8.5e-48 195.7 242 45.5
ClCG04G001680 Citrullus lanatus HOM05D005147 ORTHO05D006132 2.8e-43 180.6 156 60.3
Atru.chr10.460 Acer truncatum HOM05D005147 ORTHO05D006132 2.5e-39 167.5 107 72.9
Migut.F02087 Erythranthe guttata HOM05D005147 ORTHO05D006132 2.5e-39 167.5 107 72.0
MBI07_g33483_MAGBIO Magnolia biondii HOM05D005147 ORTHO05D006132 5.5e-39 166.4 175 49.1
Cc06_g17710 Coffea canephora HOM05D005147 ORTHO05D006132 2.1e-38 164.5 259 41.3
FAN16G1629 Fragaria x ananassa HOM05D000071 ORTHO05D006132 1.2e-36 158.7 95 77.9
FAN17G2636 Fragaria x ananassa HOM05D005147 ORTHO05D006132 2.6e-36 157.5 95 75.8
PRCOL_00001696 Prasinoderma coloniale HOM05D005147 ORTHO05D006132 9.8e-36 155.6 507 30.4
Cfa026444 Carpinus fangiana HOM05D005147 ORTHO05D006132 4.9e-35 153.3 388 30.9
SEGI_04471 Sequoiadendron giganteum HOM05D005147 ORTHO05D006132 2.4e-34 151.0 114 68.4
Migut.F02088 Erythranthe guttata HOM05D005147 ORTHO05D006132 5.0e-32 143.3 140 52.9
Haze_04617 Corylus avellana HOM05D005147 ORTHO05D006132 1.4e-29 135.2 72 86.1
vmacro07058 Vaccinium macrocarpon HOM05D005147 ORTHO05D006132 2.0e-28 131.3 72 83.3
HPP92_011450 Vanilla planifolia HOM05D005147 ORTHO05D006132 9.2e-26 122.5 263 33.5
FAN03G2245 Fragaria x ananassa HOM05D005147 ORTHO05D006132 6.0e-25 119.8 78 74.4
Haze_04615 Corylus avellana HOM05D005147 ORTHO05D006132 4.7e-22 110.2 81 66.7
Hma1.2p1_1029F.1_g249580 Hydrangea macrophylla HOM05D005147 ORTHO05D006132 2.0e-20 104.8 233 35.2
Hma1.2p1_3112F.1_g332769 Hydrangea macrophylla HOM05D005147 ORTHO05D006132 2.0e-20 104.8 233 35.2
C05p37710 Brassica napus HOM05D005147 ORTHO05D006132 5.8e-20 103.2 83 63.9
BcaC06g35123 Brassica carinata HOM05D005147 ORTHO05D006132 7.5e-20 102.8 81 63.0
SEGI_33004 Sequoiadendron giganteum HOM05D005147 ORTHO05D006132 6.4e-19 99.8 77 57.1
CDE09G1068 Ceratophyllum demersum HOM05D005147 ORTHO05D006132 1.1e-18 99.0 63 69.8
BolC9t55790H Brassica oleracea HOM05D005147 ORTHO05D006132 1.4e-18 98.6 83 61.4
BraA09t41139Z Brassica rapa HOM05D005147 ORTHO05D006132 9.2e-18 95.9 81 59.3
A03p60580 Brassica napus HOM05D005147 ORTHO05D006132 2.7e-17 94.4 81 59.3
BcaC05g27774 Brassica carinata HOM05D005147 ORTHO05D006132 3.5e-17 94.0 81 58.0
C02p46260 Brassica napus HOM05D005147 ORTHO05D006132 6.0e-17 93.2 72 63.9
A09p57480 Brassica napus HOM05D005147 ORTHO05D006132 3.0e-16 90.9 73 61.6
SHI13697 Sapria himalayana HOM05D005147 ORTHO05D000014 3.9e-16 90.5 61 60.7
C02p08230 Brassica napus HOM05D005147 ORTHO05D006132 7.3e-15 86.3 81 54.3
BcaC04g21654 Brassica carinata HOM05D000305 ORTHO05D000065 9.5e-15 85.9 68 61.8
FAN20G3080 Fragaria x ananassa HOM05D000686 ORTHO05D002248 5.6e-07 60.1 80 35.0
FvH4_2g15540 Fragaria vesca HOM05D002097 ORTHO05D002248 7.3e-07 59.7 80 35.0
FAN24G1581 Fragaria x ananassa HOM05D000686 ORTHO05D000512 7.3e-07 59.7 80 35.0
RcHm_v2.0_Chr6g0278711 Rosa chinensis HOM05D002097 ORTHO05D002248 7.3e-07 59.7 80 35.0
Lalb_Chr01g0000001 Lupinus albus HOM05D001563 ORTHO05D001956 9.6e-07 59.3 229 25.8
SMO172G0032 Selaginella moellendorffii HOM05D002097 ORTHO05D002248 1.6e-06 58.5 254 25.6
RcHm_v2.0_Chr6g0278641 Rosa chinensis HOM05D002097 ORTHO05D002248 2.8e-06 57.8 80 36.2
Cre07.g328400 Chlamydomonas reinhardtii HOM05D005264 ORTHO05D005428 6.2e-06 56.6 79 39.2


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