Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G030880 Cucumis sativus L. HOM05D005147 ORTHO05D006132 3.6e-288 994.2 499 100.0
MELO3C008955.2 Cucumis melo HOM05D005147 ORTHO05D006132 2.6e-278 961.4 499 96.2
Sed0015307 Sechium edule HOM05D005147 ORTHO05D006132 1.6e-235 819.3 502 82.7
Cfa006223 Carpinus fangiana HOM05D005147 ORTHO05D006132 4.4e-193 678.3 501 70.3
QL10p016598 Quercus lobata HOM05D005147 ORTHO05D006132 2.2e-192 676.0 498 70.3
Glyma.10G171500 Glycine max HOM05D005147 ORTHO05D006132 2.0e-190 669.5 493 70.2
CiPaw.08G111700 Carya illinoinensis HOM05D005147 ORTHO05D006132 1.5e-188 663.3 496 69.4
VMungo0720G1244 Vigna mungo HOM05D005147 ORTHO05D006132 9.5e-188 660.6 496 70.0
Phvul.007G117900 Phaseolus vulgaris HOM05D005147 ORTHO05D006132 2.3e-186 656.0 496 68.5
Prupe.6G365400 Prunus persica HOM05D005147 ORTHO05D006132 2.3e-186 656.0 499 68.3
Lj5g0011670 Lotus japonicus HOM05D005147 ORTHO05D006132 3.4e-185 652.1 491 67.8
TAR362G0740 Trochodendron aralioides HOM05D005147 ORTHO05D006132 5.8e-185 651.4 506 67.2
Gohir.A02G107106 Gossypium hirsutum HOM05D005147 ORTHO05D006132 2.1e-182 642.9 518 64.7
Gorai.003G087900 Gossypium raimondii HOM05D005147 ORTHO05D006132 2.1e-182 642.9 514 65.2
Gohir.D03G072200 Gossypium hirsutum HOM05D005147 ORTHO05D006132 7.8e-182 641.0 513 64.7
Duzib128G1295 Durio zibethinus HOM05D005147 ORTHO05D006132 1.0e-181 640.6 517 64.2
MD12G1261400 Malus domestica HOM05D005147 ORTHO05D006132 1.0e-181 640.6 501 66.3
MD00G1017100 Malus domestica HOM05D005147 ORTHO05D006132 2.3e-181 639.4 501 66.5
Actinidia19646 Actinidia chinensis HOM05D005147 ORTHO05D006132 3.0e-181 639.0 491 67.2
arahy.Tifrunner.gnm1.ann1.9U7TDI Arachis hypogaea HOM05D005147 ORTHO05D006132 2.1e-179 632.9 486 66.3
arahy.Tifrunner.gnm1.ann1.IZJM3F Arachis hypogaea HOM05D005147 ORTHO05D006132 2.8e-179 632.5 487 66.1
CSS0016526 Camellia sinensis var. sinensis HOM05D005147 ORTHO05D006132 3.6e-179 632.1 498 65.9
Lalb_Chr06g0168531 Lupinus albus HOM05D005147 ORTHO05D006132 5.2e-178 628.2 502 65.1
CANSAT64G0126 Cannabis sativa HOM05D005147 ORTHO05D006132 6.8e-178 627.9 500 65.2
RcHm_v2.0_Chr3g0447391 Rosa chinensis HOM05D005147 ORTHO05D006132 7.6e-177 624.4 488 67.0
TWI36G1457 Tripterygium wilfordii HOM05D005147 ORTHO05D006132 9.9e-177 624.0 536 62.5
THA.LOC104820936 Tarenaya hassleriana HOM05D005147 ORTHO05D006132 1.7e-176 623.2 512 63.5
Lalb_Chr02g0149501 Lupinus albus HOM05D005147 ORTHO05D006132 3.7e-176 622.1 491 65.4
Atru.chr2.212 Acer truncatum HOM05D005147 ORTHO05D006132 1.9e-175 619.8 532 61.8
Aqoxy3G00601 Aquilegia oxysepala HOM05D005147 ORTHO05D006132 2.7e-174 615.9 508 63.2
Potri.010G179000 Populus trichocarpa HOM05D005147 ORTHO05D006132 3.5e-174 615.5 549 60.7
Sc16g0010670 Simmondsia chinensis HOM05D005147 ORTHO05D006132 1.0e-173 614.0 508 64.0
Ca_09963_v3 Cicer arietinum L. HOM05D005147 ORTHO05D006132 1.7e-173 613.2 566 59.7
FAN02G4331 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.2e-171 607.1 485 64.9
FAN09G3357 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.2e-171 607.1 492 64.4
PGR119G0204 Punica granatum HOM05D005147 ORTHO05D006132 1.2e-171 607.1 502 62.0
HanXRQChr16g0511771 Helianthus annuus HOM05D005147 ORTHO05D006132 3.6e-171 605.5 489 63.8
Dinv17137 Davidia involucrata HOM05D005147 ORTHO05D006132 6.8e-170 601.3 464 67.5
Nn3g19309 Nelumbo nucifera HOM05D005147 ORTHO05D006132 2.0e-169 599.7 506 62.3
MSTRG.27416 Avicennia marina HOM05D005147 ORTHO05D006132 2.6e-169 599.4 495 62.6
Zm00001eb196230 Zea mays HOM05D005147 ORTHO05D006132 2.6e-169 599.4 484 63.2
Cc09_g04140 Coffea canephora HOM05D005147 ORTHO05D006132 3.4e-169 599.0 499 60.9
PSO675G5070 Papaver somniferum HOM05D005147 ORTHO05D006132 4.4e-169 598.6 514 62.3
Ah.06g195220 Amaranthus hybridus HOM05D005147 ORTHO05D006132 1.3e-168 597.0 488 63.3
Aa31LG11G13360 Aethionema arabicum HOM05D005147 ORTHO05D006132 2.9e-168 595.9 487 63.2
ATR0743G159 Amborella trichopoda HOM05D005147 ORTHO05D006132 3.8e-168 595.5 511 60.5
DCAR_023252 Daucus carota HOM05D005147 ORTHO05D006132 3.8e-168 595.5 500 63.0
Hund07384 Selenicereus undatus HOM05D005147 ORTHO05D006132 5.4e-167 591.7 498 61.6
Nitab4.5_0001003g0200 Nicotiana tabacum HOM05D005147 ORTHO05D006132 7.1e-167 591.3 490 62.2
PSO017G2923 Papaver somniferum HOM05D005147 ORTHO05D006132 2.1e-166 589.7 509 61.5
Lsat_1_v5_gn_1_127920 Lactuca sativa HOM05D005147 ORTHO05D006132 4.6e-166 588.6 492 64.2
Os04g0496400 Oryza sativa ssp. japonica HOM05D005147 ORTHO05D006132 6.0e-166 588.2 489 61.6
Solyc11g008700.2 Solanum lycopersicum HOM05D005147 ORTHO05D006132 1.0e-165 587.4 490 61.0
Thecc.07G106800 Theobroma cacao HOM05D005147 ORTHO05D006132 1.3e-165 587.0 474 66.2
Medtr1g078210 Medicago truncatula HOM05D005147 ORTHO05D006132 1.7e-165 586.6 497 64.4
Zm00001eb093390 Zea mays HOM05D005147 ORTHO05D006132 2.3e-165 586.3 490 61.6
Sp6g27900 Schrenkiella parvula HOM05D005147 ORTHO05D006132 2.1e-163 579.7 509 59.7
ECA232G4784 Erigeron canadensis HOM05D005147 ORTHO05D006132 2.8e-163 579.3 486 62.3
Eucgr.B01442 Eucalyptus grandis HOM05D005147 ORTHO05D006132 6.2e-163 578.2 470 64.7
Peaxi162Scf00254g00618 Petunia axillaris HOM05D005147 ORTHO05D006132 6.2e-163 578.2 492 60.8
Manes.13G000300 Manihot esculenta HOM05D005147 ORTHO05D006132 5.3e-162 575.1 538 58.9
Lj8A197T41 Lonicera japonica HOM05D005147 ORTHO05D006132 2.6e-161 572.8 586 54.9
AL6G27150 Arabidopsis lyrata HOM05D005147 ORTHO05D006132 3.4e-161 572.4 517 58.2
AT5G16260 Arabidopsis thaliana HOM05D005147 ORTHO05D006132 3.4e-161 572.4 516 58.1
Sopen11g004480 Solanum pennellii HOM05D005147 ORTHO05D006132 1.7e-160 570.1 490 60.0
Carub.0006s1445 Capsella rubella HOM05D005147 ORTHO05D006132 2.9e-160 569.3 515 58.4
Ciclev10000750m.g Citrus clementina HOM05D005147 ORTHO05D006132 4.2e-159 565.5 487 61.4
AUR62000267 Chenopodium quinoa HOM05D005147 ORTHO05D006132 1.6e-158 563.5 509 59.3
Rhsim05G0163700 Rhododendron simsii HOM05D005147 ORTHO05D006132 2.1e-158 563.1 456 64.3
BcaB08g36860 Brassica carinata HOM05D005147 ORTHO05D006132 4.6e-158 562.0 501 58.7
Sabra08G0058100 Salix brachista HOM05D005147 ORTHO05D006132 4.6e-158 562.0 619 52.5
FAN06G0735 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.1e-156 557.4 482 62.2
BolC9t58914H Brassica oleracea HOM05D005147 ORTHO05D006132 2.6e-153 546.2 507 57.0
BcaC04g18905 Brassica carinata HOM05D005147 ORTHO05D006132 9.9e-153 544.3 506 56.9
BraA10t44347Z Brassica rapa HOM05D005147 ORTHO05D006132 1.1e-151 540.8 511 56.0
Nitab4.5_0003928g0030 Nicotiana tabacum HOM05D005147 ORTHO05D006132 3.2e-151 539.3 484 56.6
unitig_747.g21462 Utricularia gibba HOM05D005147 ORTHO05D006132 2.6e-145 519.6 488 56.1
SGA_v2.0_scaffold62G21485 Striga asiatica HOM05D005147 ORTHO05D006132 3.4e-145 519.2 491 57.8
GSVIVG01007182001 Vitis vinifera HOM05D005147 ORTHO05D006132 9.3e-143 511.1 484 57.6
Thhalv10013396m.g Eutrema salsugineum HOM05D005147 ORTHO05D006132 1.8e-141 506.9 501 54.5
FvH4_6g00060 Fragaria vesca HOM05D005147 ORTHO05D006132 3.9e-141 505.8 435 62.1
FAN06G0198 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.1e-140 504.2 496 57.1
Sabra10G0137300 Salix brachista HOM05D005147 ORTHO05D006132 4.3e-140 502.3 606 51.2
Glyma.20G218800 Glycine max HOM05D005147 ORTHO05D006132 3.8e-136 489.2 333 75.4
FvH4_7g28070 Fragaria vesca HOM05D005147 ORTHO05D001533 5.5e-135 485.3 415 62.9
EL10Ac4g10030 Beta vulgaris HOM05D005147 ORTHO05D006132 1.0e-133 481.1 511 53.0
Mapoly0021s0138 Marchantia polymorpha HOM05D005147 ORTHO05D006132 1.5e-129 467.2 525 48.6
SHI13696 Sapria himalayana HOM05D005147 ORTHO05D006132 2.7e-126 456.4 394 61.4
GSVIVG01003992001 Vitis vinifera HOM05D005147 ORTHO05D006132 1.4e-125 454.1 325 70.2
TPR.G10532 Trifolium pratense HOM05D005147 ORTHO05D006132 2.4e-122 443.4 340 68.8
vmacro07057 Vaccinium macrocarpon HOM05D005147 ORTHO05D006132 5.3e-122 442.2 575 47.5
Potri.008G078200 Populus trichocarpa HOM05D005147 ORTHO05D006132 1.5e-121 440.7 333 67.9
Actinidia40010 Actinidia chinensis HOM05D005147 ORTHO05D006132 2.6e-121 439.9 411 60.3
A10p22800 Brassica napus HOM05D001331 ORTHO05D006132 1.6e-118 430.6 453 52.3
Psat6g051880 Pisum sativum HOM05D005147 ORTHO05D006132 1.5e-116 424.1 373 63.5
ClCG04G001690 Citrullus lanatus HOM05D005147 ORTHO05D006132 1.7e-115 420.6 216 97.7
Cpa.g.sc88.4 Carica papaya HOM05D005147 ORTHO05D006132 5.3e-114 415.6 429 55.5
CARHR197050 Cardamine hirsuta HOM05D005147 ORTHO05D006132 2.6e-113 413.3 329 65.3
FAN10G0474 Fragaria x ananassa HOM05D005147 ORTHO05D001533 1.3e-112 411.0 430 54.4
SMO364G0719 Selaginella moellendorffii HOM05D005147 ORTHO05D006132 1.7e-112 410.6 501 45.1
Oeu040505.2 Olea europaea HOM05D005147 ORTHO05D006132 3.2e-111 406.4 284 70.1
CDE09G1177 Ceratophyllum demersum HOM05D005147 ORTHO05D006132 7.5e-108 395.2 374 57.5
AUR62006615 Chenopodium quinoa HOM05D005147 ORTHO05D006132 3.1e-106 389.8 385 56.9
Pp3c20_9510 Physcomitrium patens HOM05D005147 ORTHO05D006132 7.0e-106 388.7 445 49.9
CBR_g50472 Chara braunii HOM05D005147 ORTHO05D006132 1.9e-103 380.6 652 38.0
AagrBONN_evm.TU.Sc2ySwM_368.1306 Anthoceros agrestis HOM05D005147 ORTHO05D006132 1.4e-98 364.4 494 42.9
Actinidia05852 Actinidia chinensis HOM05D005147 ORTHO05D006132 3.5e-97 359.8 215 80.5
Zm00001eb321590 Zea mays HOM05D005147 ORTHO05D006132 3.6e-94 349.7 223 74.9
Nitab4.5_0000798g0160 Nicotiana tabacum HOM05D005147 ORTHO05D006132 3.7e-83 313.2 241 64.3
ClCG04G001680 Citrullus lanatus HOM05D005147 ORTHO05D006132 7.5e-76 288.9 157 87.9
HPP92_011449 Vanilla planifolia HOM05D005147 ORTHO05D006132 1.1e-69 268.5 180 71.1
CBR_g19604 Chara braunii HOM05D005147 ORTHO05D006132 2.3e-69 267.3 572 33.4
Zm00001eb058540 Zea mays HOM05D005147 ORTHO05D006132 1.7e-64 251.1 214 62.1
Cre17.g707050 Chlamydomonas reinhardtii HOM05D005147 ORTHO05D006132 6.6e-64 249.2 552 34.4
MCO16G453 Micromonas commoda HOM05D005147 ORTHO05D006132 2.6e-60 237.3 244 54.1
Zm00001eb092200 Zea mays HOM05D005147 ORTHO05D006132 3.2e-58 230.3 158 71.5
Haze_04614 Corylus avellana HOM05D005147 ORTHO05D006132 1.2e-49 201.8 156 66.0
Nitab4.5_0015042g0010 Nicotiana tabacum HOM05D005147 ORTHO05D006132 4.0e-45 186.8 242 44.2
Atru.chr10.460 Acer truncatum HOM05D005147 ORTHO05D006132 1.9e-42 177.9 107 75.7
Migut.F02087 Erythranthe guttata HOM05D005147 ORTHO05D006132 5.4e-42 176.4 107 75.7
MBI07_g33483_MAGBIO Magnolia biondii HOM05D005147 ORTHO05D006132 3.3e-39 167.2 176 52.8
SEGI_04471 Sequoiadendron giganteum HOM05D005147 ORTHO05D006132 2.0e-36 157.9 117 65.8
PRCOL_00001696 Prasinoderma coloniale HOM05D005147 ORTHO05D006132 2.6e-36 157.5 545 28.1
FAN17G2636 Fragaria x ananassa HOM05D005147 ORTHO05D006132 7.6e-36 156.0 95 73.7
FAN16G1629 Fragaria x ananassa HOM05D000071 ORTHO05D006132 9.9e-36 155.6 95 74.7
Cc06_g17710 Coffea canephora HOM05D005147 ORTHO05D006132 2.2e-35 154.5 278 39.6
Migut.F02088 Erythranthe guttata HOM05D005147 ORTHO05D006132 4.6e-33 146.7 144 52.1
Cfa026444 Carpinus fangiana HOM05D005147 ORTHO05D006132 3.0e-32 144.1 399 29.3
Haze_04617 Corylus avellana HOM05D005147 ORTHO05D006132 2.1e-30 137.9 72 84.7
HPP92_011450 Vanilla planifolia HOM05D005147 ORTHO05D006132 2.1e-30 137.9 277 37.2
vmacro07058 Vaccinium macrocarpon HOM05D005147 ORTHO05D006132 6.9e-29 132.9 72 81.9
Haze_04615 Corylus avellana HOM05D005147 ORTHO05D006132 7.9e-25 119.4 81 72.8
Hma1.2p1_1029F.1_g249580 Hydrangea macrophylla HOM05D005147 ORTHO05D006132 1.3e-24 118.6 260 35.8
Hma1.2p1_3112F.1_g332769 Hydrangea macrophylla HOM05D005147 ORTHO05D006132 1.3e-24 118.6 260 35.8
FAN03G2245 Fragaria x ananassa HOM05D005147 ORTHO05D006132 4.3e-23 113.6 78 67.9
C05p37710 Brassica napus HOM05D005147 ORTHO05D006132 9.0e-21 105.9 83 66.3
BcaC06g35123 Brassica carinata HOM05D005147 ORTHO05D006132 1.2e-20 105.5 81 65.4
BolC9t55790H Brassica oleracea HOM05D005147 ORTHO05D006132 2.2e-19 101.3 83 63.9
CDE09G1068 Ceratophyllum demersum HOM05D005147 ORTHO05D006132 2.2e-19 101.3 63 71.4
BraA09t41139Z Brassica rapa HOM05D005147 ORTHO05D006132 5.0e-19 100.1 81 61.7
SHI13697 Sapria himalayana HOM05D005147 ORTHO05D000014 1.1e-18 99.0 76 59.2
A03p60580 Brassica napus HOM05D005147 ORTHO05D006132 1.4e-18 98.6 81 61.7
SEGI_33004 Sequoiadendron giganteum HOM05D005147 ORTHO05D006132 1.9e-18 98.2 75 56.0
BcaC05g27774 Brassica carinata HOM05D005147 ORTHO05D006132 4.2e-18 97.1 81 60.5
C02p46260 Brassica napus HOM05D005147 ORTHO05D006132 7.2e-18 96.3 72 65.3
A09p57480 Brassica napus HOM05D005147 ORTHO05D006132 9.3e-18 95.9 87 58.6
BcaC04g21654 Brassica carinata HOM05D000305 ORTHO05D000065 1.1e-15 89.0 67 65.7
C02p08230 Brassica napus HOM05D005147 ORTHO05D006132 7.4e-15 86.3 81 55.6
Cre07.g328400 Chlamydomonas reinhardtii HOM05D005264 ORTHO05D005428 1.7e-06 58.5 87 39.1
FAN20G3080 Fragaria x ananassa HOM05D000686 ORTHO05D002248 2.2e-06 58.2 80 35.0
CANSAT25G1049 Cannabis sativa HOM05D002097 ORTHO05D002248 2.8e-06 57.8 105 34.3
RcHm_v2.0_Chr6g0278711 Rosa chinensis HOM05D002097 ORTHO05D002248 3.7e-06 57.4 87 33.3
FvH4_2g15540 Fragaria vesca HOM05D002097 ORTHO05D002248 4.8e-06 57.0 80 35.0
FAN24G1581 Fragaria x ananassa HOM05D000686 ORTHO05D000512 4.8e-06 57.0 80 35.0
SMO172G0032 Selaginella moellendorffii HOM05D002097 ORTHO05D002248 4.8e-06 57.0 290 25.9
COL.COLO4_16614 Corchorus olitorius HOM05D005264 ORTHO05D005428 6.3e-06 56.6 68 42.6
Sc08g0002840 Simmondsia chinensis HOM05D001563 ORTHO05D001956 6.3e-06 56.6 225 25.8
Dinv14120 Davidia involucrata HOM05D002097 ORTHO05D002248 8.2e-06 56.2 88 37.5
Lalb_Chr04g0258911 Lupinus albus HOM05D005264 ORTHO05D005428 8.2e-06 56.2 68 41.2
Sc10g0006820 Simmondsia chinensis HOM05D005264 ORTHO05D005428 8.2e-06 56.2 67 43.3


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