Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG11G13360 Aethionema arabicum HOM05D005147 ORTHO05D006132 6.6e-282 973.4 500 100.0
Sp6g27900 Schrenkiella parvula HOM05D005147 ORTHO05D006132 1.0e-234 816.6 522 79.1
AL6G27150 Arabidopsis lyrata HOM05D005147 ORTHO05D006132 2.2e-232 808.9 526 78.7
AT5G16260 Arabidopsis thaliana HOM05D005147 ORTHO05D006132 6.3e-232 807.4 525 78.9
Carub.0006s1445 Capsella rubella HOM05D005147 ORTHO05D006132 6.1e-227 790.8 533 76.7
BcaB08g36860 Brassica carinata HOM05D005147 ORTHO05D006132 1.7e-221 772.7 518 76.8
THA.LOC104820936 Tarenaya hassleriana HOM05D005147 ORTHO05D006132 1.4e-210 736.5 506 73.9
BolC9t58914H Brassica oleracea HOM05D005147 ORTHO05D006132 1.8e-210 736.1 523 73.8
BcaC04g18905 Brassica carinata HOM05D005147 ORTHO05D006132 2.3e-210 735.7 523 73.8
BraA10t44347Z Brassica rapa HOM05D005147 ORTHO05D006132 1.8e-207 726.1 522 73.0
Thhalv10013396m.g Eutrema salsugineum HOM05D005147 ORTHO05D006132 6.6e-205 717.6 527 71.3
Glyma.10G171500 Glycine max HOM05D005147 ORTHO05D006132 2.4e-175 619.4 485 64.5
VMungo0720G1244 Vigna mungo HOM05D005147 ORTHO05D006132 1.6e-174 616.7 494 62.8
Cfa006223 Carpinus fangiana HOM05D005147 ORTHO05D006132 2.7e-174 615.9 494 63.0
Duzib128G1295 Durio zibethinus HOM05D005147 ORTHO05D006132 2.7e-174 615.9 531 59.3
QL10p016598 Quercus lobata HOM05D005147 ORTHO05D006132 3.0e-173 612.5 486 65.0
Lalb_Chr02g0149501 Lupinus albus HOM05D005147 ORTHO05D006132 1.9e-172 609.8 486 63.8
Lj5g0011670 Lotus japonicus HOM05D005147 ORTHO05D006132 3.3e-172 609.0 503 62.8
Gorai.003G087900 Gossypium raimondii HOM05D005147 ORTHO05D006132 9.6e-172 607.4 527 60.0
Phvul.007G117900 Phaseolus vulgaris HOM05D005147 ORTHO05D006132 9.6e-172 607.4 490 62.4
Gohir.D03G072200 Gossypium hirsutum HOM05D005147 ORTHO05D006132 2.8e-171 605.9 525 60.2
Gohir.A02G107106 Gossypium hirsutum HOM05D005147 ORTHO05D006132 8.1e-171 604.4 530 60.2
A10p22800 Brassica napus HOM05D001331 ORTHO05D006132 2.0e-169 599.7 474 68.1
MELO3C008955.2 Cucumis melo HOM05D005147 ORTHO05D006132 7.6e-169 597.8 489 63.8
arahy.Tifrunner.gnm1.ann1.9U7TDI Arachis hypogaea HOM05D005147 ORTHO05D006132 9.9e-169 597.4 490 63.1
Lalb_Chr06g0168531 Lupinus albus HOM05D005147 ORTHO05D006132 1.3e-168 597.0 500 61.6
arahy.Tifrunner.gnm1.ann1.IZJM3F Arachis hypogaea HOM05D005147 ORTHO05D006132 2.9e-168 595.9 490 62.7
TWI36G1457 Tripterygium wilfordii HOM05D005147 ORTHO05D006132 2.9e-168 595.9 527 58.1
CsaV3_4G030880 Cucumis sativus L. HOM05D005147 ORTHO05D006132 3.8e-168 595.5 487 63.2
TAR362G0740 Trochodendron aralioides HOM05D005147 ORTHO05D006132 8.4e-168 594.3 493 61.5
CSS0016526 Camellia sinensis var. sinensis HOM05D005147 ORTHO05D006132 1.4e-167 593.6 492 60.6
Atru.chr2.212 Acer truncatum HOM05D005147 ORTHO05D006132 4.6e-166 588.6 522 58.8
Actinidia19646 Actinidia chinensis HOM05D005147 ORTHO05D006132 3.0e-165 585.9 486 60.9
CiPaw.08G111700 Carya illinoinensis HOM05D005147 ORTHO05D006132 6.6e-165 584.7 488 61.7
Nitab4.5_0001003g0200 Nicotiana tabacum HOM05D005147 ORTHO05D006132 8.7e-165 584.3 500 59.0
Potri.010G179000 Populus trichocarpa HOM05D005147 ORTHO05D006132 4.3e-164 582.0 538 57.1
Solyc11g008700.2 Solanum lycopersicum HOM05D005147 ORTHO05D006132 4.3e-164 582.0 504 58.1
Prupe.6G365400 Prunus persica HOM05D005147 ORTHO05D006132 5.6e-164 581.6 489 61.1
Ah.06g195220 Amaranthus hybridus HOM05D005147 ORTHO05D006132 4.8e-163 578.6 489 60.7
Sc16g0010670 Simmondsia chinensis HOM05D005147 ORTHO05D006132 1.1e-162 577.4 499 60.7
FAN09G3357 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.8e-162 576.6 497 59.0
Aqoxy3G00601 Aquilegia oxysepala HOM05D005147 ORTHO05D006132 1.5e-161 573.5 504 58.5
Cc09_g04140 Coffea canephora HOM05D005147 ORTHO05D006132 2.6e-161 572.8 491 59.1
Sed0015307 Sechium edule HOM05D005147 ORTHO05D006132 3.4e-161 572.4 489 60.7
ATR0743G159 Amborella trichopoda HOM05D005147 ORTHO05D006132 4.5e-161 572.0 499 58.1
HanXRQChr16g0511771 Helianthus annuus HOM05D005147 ORTHO05D006132 4.5e-161 572.0 485 60.2
CANSAT64G0126 Cannabis sativa HOM05D005147 ORTHO05D006132 5.8e-161 571.6 492 62.0
FAN02G4331 Fragaria x ananassa HOM05D005147 ORTHO05D006132 7.6e-161 571.2 484 60.1
Peaxi162Scf00254g00618 Petunia axillaris HOM05D005147 ORTHO05D006132 9.9e-161 570.9 490 58.6
RcHm_v2.0_Chr3g0447391 Rosa chinensis HOM05D005147 ORTHO05D006132 1.3e-160 570.5 486 60.7
MD00G1017100 Malus domestica HOM05D005147 ORTHO05D006132 3.8e-160 568.9 495 59.4
Manes.13G000300 Manihot esculenta HOM05D005147 ORTHO05D006132 4.9e-160 568.5 552 54.9
PSO675G5070 Papaver somniferum HOM05D005147 ORTHO05D006132 6.4e-160 568.2 499 58.9
Nn3g19309 Nelumbo nucifera HOM05D005147 ORTHO05D006132 4.2e-159 565.5 504 57.7
Ca_09963_v3 Cicer arietinum L. HOM05D005147 ORTHO05D006132 1.6e-158 563.5 574 53.7
MD12G1261400 Malus domestica HOM05D005147 ORTHO05D006132 2.1e-158 563.1 495 58.4
Sopen11g004480 Solanum pennellii HOM05D005147 ORTHO05D006132 2.1e-158 563.1 504 57.9
PGR119G0204 Punica granatum HOM05D005147 ORTHO05D006132 3.5e-158 562.4 487 61.6
Ciclev10000750m.g Citrus clementina HOM05D005147 ORTHO05D006132 7.9e-158 561.2 473 60.5
Hund07384 Selenicereus undatus HOM05D005147 ORTHO05D006132 3.9e-157 558.9 502 59.0
Dinv17137 Davidia involucrata HOM05D005147 ORTHO05D006132 5.1e-157 558.5 463 61.6
PSO017G2923 Papaver somniferum HOM05D005147 ORTHO05D006132 6.7e-157 558.1 492 58.5
DCAR_023252 Daucus carota HOM05D005147 ORTHO05D006132 2.8e-155 552.7 492 58.7
Eucgr.B01442 Eucalyptus grandis HOM05D005147 ORTHO05D006132 3.7e-155 552.4 466 60.9
MSTRG.27416 Avicennia marina HOM05D005147 ORTHO05D006132 1.1e-154 550.8 499 56.1
Zm00001eb196230 Zea mays HOM05D005147 ORTHO05D006132 1.1e-154 550.8 487 56.9
Lsat_1_v5_gn_1_127920 Lactuca sativa HOM05D005147 ORTHO05D006132 2.0e-153 546.6 485 58.6
Medtr1g078210 Medicago truncatula HOM05D005147 ORTHO05D006132 2.6e-153 546.2 496 59.3
Sabra08G0058100 Salix brachista HOM05D005147 ORTHO05D006132 5.8e-153 545.0 611 50.2
AUR62000267 Chenopodium quinoa HOM05D005147 ORTHO05D006132 1.7e-152 543.5 519 56.5
CARHR197050 Cardamine hirsuta HOM05D005147 ORTHO05D006132 2.2e-152 543.1 324 84.6
Zm00001eb093390 Zea mays HOM05D005147 ORTHO05D006132 8.4e-152 541.2 488 56.4
ECA232G4784 Erigeron canadensis HOM05D005147 ORTHO05D006132 4.6e-150 535.4 485 56.7
Os04g0496400 Oryza sativa ssp. japonica HOM05D005147 ORTHO05D006132 2.3e-149 533.1 483 56.3
Thecc.07G106800 Theobroma cacao HOM05D005147 ORTHO05D006132 4.0e-146 522.3 474 59.1
Rhsim05G0163700 Rhododendron simsii HOM05D005147 ORTHO05D006132 1.5e-145 520.4 445 59.8
FAN06G0735 Fragaria x ananassa HOM05D005147 ORTHO05D006132 3.8e-144 515.8 480 57.1
Nitab4.5_0003928g0030 Nicotiana tabacum HOM05D005147 ORTHO05D006132 1.2e-142 510.8 486 53.7
Lj8A197T41 Lonicera japonica HOM05D005147 ORTHO05D006132 3.9e-141 505.8 580 50.2
GSVIVG01007182001 Vitis vinifera HOM05D005147 ORTHO05D006132 2.4e-138 496.5 501 54.7
unitig_747.g21462 Utricularia gibba HOM05D005147 ORTHO05D006132 1.2e-137 494.2 488 54.1
FvH4_6g00060 Fragaria vesca HOM05D005147 ORTHO05D006132 3.4e-137 492.7 427 59.3
SGA_v2.0_scaffold62G21485 Striga asiatica HOM05D005147 ORTHO05D006132 5.5e-135 485.3 494 53.6
Sabra10G0137300 Salix brachista HOM05D005147 ORTHO05D006132 2.1e-134 483.4 633 45.8
EL10Ac4g10030 Beta vulgaris HOM05D005147 ORTHO05D006132 1.4e-133 480.7 522 52.5
FAN06G0198 Fragaria x ananassa HOM05D005147 ORTHO05D006132 8.2e-131 471.5 504 52.4
Mapoly0021s0138 Marchantia polymorpha HOM05D005147 ORTHO05D006132 5.5e-127 458.8 522 48.7
FvH4_7g28070 Fragaria vesca HOM05D005147 ORTHO05D001533 2.7e-126 456.4 418 58.4
Glyma.20G218800 Glycine max HOM05D005147 ORTHO05D006132 1.0e-120 438.0 332 68.1
SHI13696 Sapria himalayana HOM05D005147 ORTHO05D006132 2.2e-120 436.8 401 57.4
Psat6g051880 Pisum sativum HOM05D005147 ORTHO05D006132 6.7e-117 425.2 377 59.4
Actinidia40010 Actinidia chinensis HOM05D005147 ORTHO05D006132 5.7e-116 422.2 411 56.7
GSVIVG01003992001 Vitis vinifera HOM05D005147 ORTHO05D006132 2.2e-112 410.2 323 64.7
Cpa.g.sc88.4 Carica papaya HOM05D005147 ORTHO05D006132 9.4e-111 404.8 416 54.8
vmacro07057 Vaccinium macrocarpon HOM05D005147 ORTHO05D006132 8.0e-110 401.7 568 44.4
TPR.G10532 Trifolium pratense HOM05D005147 ORTHO05D006132 6.8e-109 398.7 337 62.3
FAN10G0474 Fragaria x ananassa HOM05D005147 ORTHO05D001533 1.2e-108 397.9 423 52.2
SMO364G0719 Selaginella moellendorffii HOM05D005147 ORTHO05D006132 1.5e-108 397.5 506 44.1
Potri.008G078200 Populus trichocarpa HOM05D005147 ORTHO05D006132 2.7e-105 386.7 331 59.8
CDE09G1177 Ceratophyllum demersum HOM05D005147 ORTHO05D006132 2.9e-104 383.3 375 54.7
Oeu040505.2 Olea europaea HOM05D005147 ORTHO05D006132 1.8e-101 374.0 284 65.1
AUR62006615 Chenopodium quinoa HOM05D005147 ORTHO05D006132 2.3e-101 373.6 399 51.6
Pp3c20_9510 Physcomitrium patens HOM05D005147 ORTHO05D006132 5.7e-100 369.0 436 47.9
AagrBONN_evm.TU.Sc2ySwM_368.1306 Anthoceros agrestis HOM05D005147 ORTHO05D006132 3.2e-90 336.7 486 41.4
CBR_g50472 Chara braunii HOM05D005147 ORTHO05D006132 5.6e-87 325.9 433 45.0
ClCG04G001690 Citrullus lanatus HOM05D005147 ORTHO05D006132 4.7e-86 322.8 216 71.8
Zm00001eb321590 Zea mays HOM05D005147 ORTHO05D006132 1.4e-82 311.2 221 67.0
Actinidia05852 Actinidia chinensis HOM05D005147 ORTHO05D006132 2.3e-80 303.9 215 66.5
Nitab4.5_0000798g0160 Nicotiana tabacum HOM05D005147 ORTHO05D006132 2.2e-75 287.3 241 58.5
Cre17.g707050 Chlamydomonas reinhardtii HOM05D005147 ORTHO05D006132 1.8e-69 267.7 548 35.4
HPP92_011449 Vanilla planifolia HOM05D005147 ORTHO05D006132 6.2e-62 242.7 180 65.6
CBR_g19604 Chara braunii HOM05D005147 ORTHO05D006132 1.3e-56 224.9 569 31.3
MCO16G453 Micromonas commoda HOM05D005147 ORTHO05D006132 6.6e-56 222.6 242 51.2
Zm00001eb058540 Zea mays HOM05D005147 ORTHO05D006132 1.6e-54 218.0 214 54.7
Zm00001eb092200 Zea mays HOM05D005147 ORTHO05D006132 1.2e-49 201.8 159 62.9
Haze_04614 Corylus avellana HOM05D005147 ORTHO05D006132 4.8e-46 189.9 151 60.9
Nitab4.5_0015042g0010 Nicotiana tabacum HOM05D005147 ORTHO05D006132 4.0e-45 186.8 165 57.6
MBI07_g33483_MAGBIO Magnolia biondii HOM05D005147 ORTHO05D006132 2.3e-40 171.0 160 54.4
ClCG04G001680 Citrullus lanatus HOM05D005147 ORTHO05D006132 5.6e-39 166.4 148 58.1
Migut.F02087 Erythranthe guttata HOM05D005147 ORTHO05D006132 1.0e-35 155.6 107 65.4
Cc06_g17710 Coffea canephora HOM05D005147 ORTHO05D006132 7.1e-34 149.4 276 38.0
Atru.chr10.460 Acer truncatum HOM05D005147 ORTHO05D006132 6.0e-33 146.4 107 64.5
SEGI_04471 Sequoiadendron giganteum HOM05D005147 ORTHO05D006132 2.3e-32 144.4 114 63.2
PRCOL_00001696 Prasinoderma coloniale HOM05D005147 ORTHO05D006132 8.7e-32 142.5 528 29.5
HPP92_011450 Vanilla planifolia HOM05D005147 ORTHO05D006132 1.5e-31 141.7 260 34.6
Migut.F02088 Erythranthe guttata HOM05D005147 ORTHO05D006132 3.7e-30 137.1 145 47.6
FAN17G2636 Fragaria x ananassa HOM05D005147 ORTHO05D006132 3.7e-30 137.1 94 63.8
FAN16G1629 Fragaria x ananassa HOM05D000071 ORTHO05D006132 4.8e-30 136.7 94 64.9
Cfa026444 Carpinus fangiana HOM05D005147 ORTHO05D006132 5.3e-29 133.3 402 27.9
C05p37710 Brassica napus HOM05D005147 ORTHO05D006132 2.1e-25 121.3 83 74.7
BcaC06g35123 Brassica carinata HOM05D005147 ORTHO05D006132 2.7e-25 120.9 81 74.1
BolC9t55790H Brassica oleracea HOM05D005147 ORTHO05D006132 5.1e-24 116.7 83 72.3
Haze_04617 Corylus avellana HOM05D005147 ORTHO05D006132 1.5e-23 115.2 72 73.6
BraA09t41139Z Brassica rapa HOM05D005147 ORTHO05D006132 9.7e-23 112.5 81 69.1
Haze_04615 Corylus avellana HOM05D005147 ORTHO05D006132 1.6e-22 111.7 81 67.9
A03p60580 Brassica napus HOM05D005147 ORTHO05D006132 2.8e-22 110.9 81 69.1
BcaC05g27774 Brassica carinata HOM05D005147 ORTHO05D006132 8.2e-22 109.4 81 67.9
vmacro07058 Vaccinium macrocarpon HOM05D005147 ORTHO05D006132 1.4e-21 108.6 72 66.7
A09p57480 Brassica napus HOM05D005147 ORTHO05D006132 1.8e-21 108.2 87 65.5
C02p46260 Brassica napus HOM05D005147 ORTHO05D006132 5.3e-21 106.7 79 68.4
C02p08230 Brassica napus HOM05D005147 ORTHO05D006132 9.0e-21 105.9 86 65.1
FAN03G2245 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.5e-20 105.1 78 62.8
BcaC04g21654 Brassica carinata HOM05D000305 ORTHO05D000065 1.7e-19 101.7 68 72.1
Hma1.2p1_1029F.1_g249580 Hydrangea macrophylla HOM05D005147 ORTHO05D006132 1.6e-17 95.1 272 30.1
Hma1.2p1_3112F.1_g332769 Hydrangea macrophylla HOM05D005147 ORTHO05D006132 1.6e-17 95.1 272 30.1
SEGI_33004 Sequoiadendron giganteum HOM05D005147 ORTHO05D006132 1.6e-17 95.1 75 56.0
SHI13697 Sapria himalayana HOM05D005147 ORTHO05D000014 3.6e-17 94.0 57 68.4
CDE09G1068 Ceratophyllum demersum HOM05D005147 ORTHO05D006132 1.3e-14 85.5 61 60.7
HPP92_016158 Vanilla planifolia HOM05D002097 ORTHO05D002248 7.4e-07 59.7 80 35.0
FAN20G3080 Fragaria x ananassa HOM05D000686 ORTHO05D002248 2.2e-06 58.2 80 35.0
RcHm_v2.0_Chr6g0278711 Rosa chinensis HOM05D002097 ORTHO05D002248 2.2e-06 58.2 87 33.3
HPP92_004408 Vanilla planifolia HOM05D002097 ORTHO05D002248 2.2e-06 58.2 80 33.8
FvH4_2g15540 Fragaria vesca HOM05D002097 ORTHO05D002248 2.8e-06 57.8 80 35.0
FAN24G1581 Fragaria x ananassa HOM05D000686 ORTHO05D000512 2.8e-06 57.8 80 35.0
Hma1.2p1_0032F.1_g019280 Hydrangea macrophylla HOM05D002097 ORTHO05D002248 2.8e-06 57.8 116 32.8
Cre07.g328400 Chlamydomonas reinhardtii HOM05D005264 ORTHO05D005428 4.8e-06 57.0 71 45.1
CANSAT01G0666 Cannabis sativa HOM05D001563 ORTHO05D001956 6.3e-06 56.6 234 26.5
Nitab4.5_0002396g0030 Nicotiana tabacum HOM05D002097 ORTHO05D002248 8.2e-06 56.2 86 37.2


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