Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G16260 Arabidopsis thaliana HOM05D005147 ORTHO05D006132 6.9e-298 1026.5 520 100.0
AL6G27150 Arabidopsis lyrata HOM05D005147 ORTHO05D006132 7.1e-287 989.9 520 95.4
Carub.0006s1445 Capsella rubella HOM05D005147 ORTHO05D006132 3.6e-270 934.5 523 91.0
Sp6g27900 Schrenkiella parvula HOM05D005147 ORTHO05D006132 7.0e-250 867.1 525 84.2
BcaB08g36860 Brassica carinata HOM05D005147 ORTHO05D006132 6.3e-235 817.4 518 81.5
Aa31LG11G13360 Aethionema arabicum HOM05D005147 ORTHO05D006132 2.5e-231 805.4 525 78.9
BolC9t58914H Brassica oleracea HOM05D005147 ORTHO05D006132 9.2e-226 786.9 518 79.0
BcaC04g18905 Brassica carinata HOM05D005147 ORTHO05D006132 4.5e-225 784.6 518 78.8
THA.LOC104820936 Tarenaya hassleriana HOM05D005147 ORTHO05D006132 3.9e-224 781.6 526 75.9
Thhalv10013396m.g Eutrema salsugineum HOM05D005147 ORTHO05D006132 3.1e-221 771.9 518 78.6
BraA10t44347Z Brassica rapa HOM05D005147 ORTHO05D006132 2.4e-218 762.3 517 76.2
A10p22800 Brassica napus HOM05D001331 ORTHO05D006132 1.7e-179 633.3 471 71.3
Duzib128G1295 Durio zibethinus HOM05D005147 ORTHO05D006132 2.6e-172 609.4 527 60.9
Glyma.10G171500 Glycine max HOM05D005147 ORTHO05D006132 4.2e-170 602.1 520 61.2
VMungo0720G1244 Vigna mungo HOM05D005147 ORTHO05D006132 6.0e-169 598.2 519 61.1
Gorai.003G087900 Gossypium raimondii HOM05D005147 ORTHO05D006132 2.3e-168 596.3 503 61.8
Cfa006223 Carpinus fangiana HOM05D005147 ORTHO05D006132 3.0e-168 595.9 517 60.9
Phvul.007G117900 Phaseolus vulgaris HOM05D005147 ORTHO05D006132 6.7e-168 594.7 521 60.1
Gohir.A02G107106 Gossypium hirsutum HOM05D005147 ORTHO05D006132 1.5e-167 593.6 507 61.9
Lj5g0011670 Lotus japonicus HOM05D005147 ORTHO05D006132 1.5e-167 593.6 512 61.3
Gohir.D03G072200 Gossypium hirsutum HOM05D005147 ORTHO05D006132 1.9e-167 593.2 518 60.2
TWI36G1457 Tripterygium wilfordii HOM05D005147 ORTHO05D006132 1.9e-167 593.2 523 59.3
QL10p016598 Quercus lobata HOM05D005147 ORTHO05D006132 2.1e-166 589.7 521 60.5
Atru.chr2.212 Acer truncatum HOM05D005147 ORTHO05D006132 3.1e-165 585.9 509 60.7
Lalb_Chr02g0149501 Lupinus albus HOM05D005147 ORTHO05D006132 2.0e-164 583.2 496 61.3
Potri.010G179000 Populus trichocarpa HOM05D005147 ORTHO05D006132 2.0e-164 583.2 529 59.2
Lalb_Chr06g0168531 Lupinus albus HOM05D005147 ORTHO05D006132 3.8e-163 578.9 501 61.7
CSS0016526 Camellia sinensis var. sinensis HOM05D005147 ORTHO05D006132 2.5e-162 576.2 498 58.8
Manes.13G000300 Manihot esculenta HOM05D005147 ORTHO05D006132 9.3e-162 574.3 544 57.5
arahy.Tifrunner.gnm1.ann1.9U7TDI Arachis hypogaea HOM05D005147 ORTHO05D006132 2.7e-161 572.8 505 59.4
MELO3C008955.2 Cucumis melo HOM05D005147 ORTHO05D006132 3.5e-161 572.4 516 58.9
arahy.Tifrunner.gnm1.ann1.IZJM3F Arachis hypogaea HOM05D005147 ORTHO05D006132 4.6e-161 572.0 505 59.0
Sc16g0010670 Simmondsia chinensis HOM05D005147 ORTHO05D006132 4.6e-161 572.0 516 58.3
TAR362G0740 Trochodendron aralioides HOM05D005147 ORTHO05D006132 4.6e-161 572.0 507 59.0
CsaV3_4G030880 Cucumis sativus L. HOM05D005147 ORTHO05D006132 6.1e-161 571.6 516 58.1
Nitab4.5_0001003g0200 Nicotiana tabacum HOM05D005147 ORTHO05D006132 1.8e-160 570.1 500 58.8
CARHR197050 Cardamine hirsuta HOM05D005147 ORTHO05D006132 3.9e-160 568.9 318 90.3
Actinidia19646 Actinidia chinensis HOM05D005147 ORTHO05D006132 5.7e-159 565.1 497 59.0
Solyc11g008700.2 Solanum lycopersicum HOM05D005147 ORTHO05D006132 1.3e-158 563.9 504 57.7
CiPaw.08G111700 Carya illinoinensis HOM05D005147 ORTHO05D006132 2.2e-158 563.1 505 58.8
RcHm_v2.0_Chr3g0447391 Rosa chinensis HOM05D005147 ORTHO05D006132 2.8e-158 562.8 504 59.7
PSO675G5070 Papaver somniferum HOM05D005147 ORTHO05D006132 3.7e-158 562.4 524 57.8
HanXRQChr16g0511771 Helianthus annuus HOM05D005147 ORTHO05D006132 1.4e-157 560.5 500 58.4
Ah.06g195220 Amaranthus hybridus HOM05D005147 ORTHO05D006132 3.1e-157 559.3 497 59.8
Ciclev10000750m.g Citrus clementina HOM05D005147 ORTHO05D006132 3.1e-157 559.3 490 59.4
Sabra08G0058100 Salix brachista HOM05D005147 ORTHO05D006132 4.1e-157 558.9 612 51.6
CANSAT64G0126 Cannabis sativa HOM05D005147 ORTHO05D006132 6.9e-157 558.1 528 56.8
FAN09G3357 Fragaria x ananassa HOM05D005147 ORTHO05D006132 6.9e-157 558.1 504 58.5
Peaxi162Scf00254g00618 Petunia axillaris HOM05D005147 ORTHO05D006132 1.2e-156 557.4 498 58.2
Prupe.6G365400 Prunus persica HOM05D005147 ORTHO05D006132 1.2e-156 557.4 509 57.4
Cc09_g04140 Coffea canephora HOM05D005147 ORTHO05D006132 2.0e-156 556.6 504 56.7
FAN02G4331 Fragaria x ananassa HOM05D005147 ORTHO05D006132 2.6e-156 556.2 500 59.0
Sed0015307 Sechium edule HOM05D005147 ORTHO05D006132 7.7e-156 554.7 517 57.3
Ca_09963_v3 Cicer arietinum L. HOM05D005147 ORTHO05D006132 1.0e-155 554.3 574 53.8
Aqoxy3G00601 Aquilegia oxysepala HOM05D005147 ORTHO05D006132 1.3e-155 553.9 515 56.3
PSO017G2923 Papaver somniferum HOM05D005147 ORTHO05D006132 1.3e-155 553.9 518 56.0
ATR0743G159 Amborella trichopoda HOM05D005147 ORTHO05D006132 2.9e-155 552.7 501 57.9
MD00G1017100 Malus domestica HOM05D005147 ORTHO05D006132 1.1e-154 550.8 500 57.4
PGR119G0204 Punica granatum HOM05D005147 ORTHO05D006132 1.9e-154 550.1 508 57.1
Sopen11g004480 Solanum pennellii HOM05D005147 ORTHO05D006132 1.9e-154 550.1 502 57.4
MD12G1261400 Malus domestica HOM05D005147 ORTHO05D006132 9.4e-154 547.7 507 57.4
Zm00001eb196230 Zea mays HOM05D005147 ORTHO05D006132 1.2e-153 547.4 505 55.4
DCAR_023252 Daucus carota HOM05D005147 ORTHO05D006132 4.6e-153 545.4 505 57.4
MSTRG.27416 Avicennia marina HOM05D005147 ORTHO05D006132 2.3e-152 543.1 503 57.7
Zm00001eb093390 Zea mays HOM05D005147 ORTHO05D006132 2.3e-152 543.1 509 54.8
Nn3g19309 Nelumbo nucifera HOM05D005147 ORTHO05D006132 1.1e-151 540.8 504 56.0
Lsat_1_v5_gn_1_127920 Lactuca sativa HOM05D005147 ORTHO05D006132 2.5e-151 539.7 504 57.3
Medtr1g078210 Medicago truncatula HOM05D005147 ORTHO05D006132 5.7e-151 538.5 510 58.2
AUR62000267 Chenopodium quinoa HOM05D005147 ORTHO05D006132 2.2e-150 536.6 510 57.8
Hund07384 Selenicereus undatus HOM05D005147 ORTHO05D006132 8.2e-150 534.6 525 55.6
ECA232G4784 Erigeron canadensis HOM05D005147 ORTHO05D006132 1.4e-149 533.9 499 57.3
Eucgr.B01442 Eucalyptus grandis HOM05D005147 ORTHO05D006132 1.8e-149 533.5 480 58.8
Dinv17137 Davidia involucrata HOM05D005147 ORTHO05D006132 2.2e-147 526.6 473 58.6
Os04g0496400 Oryza sativa ssp. japonica HOM05D005147 ORTHO05D006132 1.2e-145 520.8 501 53.9
Thecc.07G106800 Theobroma cacao HOM05D005147 ORTHO05D006132 8.8e-144 514.6 468 60.3
FAN06G0735 Fragaria x ananassa HOM05D005147 ORTHO05D006132 7.0e-141 505.0 496 55.2
Lj8A197T41 Lonicera japonica HOM05D005147 ORTHO05D006132 8.5e-139 498.0 584 49.7
Rhsim05G0163700 Rhododendron simsii HOM05D005147 ORTHO05D006132 4.2e-138 495.7 464 56.7
Sabra10G0137300 Salix brachista HOM05D005147 ORTHO05D006132 2.1e-137 493.4 632 47.6
Nitab4.5_0003928g0030 Nicotiana tabacum HOM05D005147 ORTHO05D006132 1.0e-136 491.1 496 52.4
unitig_747.g21462 Utricularia gibba HOM05D005147 ORTHO05D006132 3.1e-133 479.6 498 53.2
GSVIVG01007182001 Vitis vinifera HOM05D005147 ORTHO05D006132 3.1e-133 479.6 499 54.5
FvH4_6g00060 Fragaria vesca HOM05D005147 ORTHO05D006132 2.9e-131 473.0 447 56.8
SGA_v2.0_scaffold62G21485 Striga asiatica HOM05D005147 ORTHO05D006132 2.7e-129 466.5 503 51.7
EL10Ac4g10030 Beta vulgaris HOM05D005147 ORTHO05D006132 5.2e-128 462.2 505 52.5
FAN06G0198 Fragaria x ananassa HOM05D005147 ORTHO05D006132 8.8e-128 461.5 510 51.6
FvH4_7g28070 Fragaria vesca HOM05D005147 ORTHO05D001533 7.7e-124 448.4 414 58.0
Mapoly0021s0138 Marchantia polymorpha HOM05D005147 ORTHO05D006132 2.9e-123 446.4 522 48.3
Glyma.20G218800 Glycine max HOM05D005147 ORTHO05D006132 4.4e-119 432.6 329 67.5
SHI13696 Sapria himalayana HOM05D005147 ORTHO05D006132 1.4e-117 427.6 388 58.2
GSVIVG01003992001 Vitis vinifera HOM05D005147 ORTHO05D006132 2.8e-113 413.3 318 66.0
Cpa.g.sc88.4 Carica papaya HOM05D005147 ORTHO05D006132 1.0e-112 411.4 434 54.6
Psat6g051880 Pisum sativum HOM05D005147 ORTHO05D006132 2.0e-111 407.1 397 55.4
TPR.G10532 Trifolium pratense HOM05D005147 ORTHO05D006132 3.2e-109 399.8 335 63.0
Actinidia40010 Actinidia chinensis HOM05D005147 ORTHO05D006132 1.7e-107 394.0 425 52.2
SMO364G0719 Selaginella moellendorffii HOM05D005147 ORTHO05D006132 3.9e-107 392.9 514 43.6
Potri.008G078200 Populus trichocarpa HOM05D005147 ORTHO05D006132 6.2e-105 385.6 326 61.0
FAN10G0474 Fragaria x ananassa HOM05D005147 ORTHO05D001533 1.2e-103 381.3 460 48.9
vmacro07057 Vaccinium macrocarpon HOM05D005147 ORTHO05D006132 2.0e-103 380.6 567 42.9
Pp3c20_9510 Physcomitrium patens HOM05D005147 ORTHO05D006132 4.1e-101 372.9 439 47.8
CDE09G1177 Ceratophyllum demersum HOM05D005147 ORTHO05D006132 4.6e-100 369.4 388 52.1
Oeu040505.2 Olea europaea HOM05D005147 ORTHO05D006132 7.3e-98 362.1 282 63.5
AUR62006615 Chenopodium quinoa HOM05D005147 ORTHO05D006132 1.1e-96 358.2 398 50.8
CBR_g50472 Chara braunii HOM05D005147 ORTHO05D006132 3.3e-90 336.7 649 37.6
AagrBONN_evm.TU.Sc2ySwM_368.1306 Anthoceros agrestis HOM05D005147 ORTHO05D006132 1.1e-85 321.6 498 39.4
ClCG04G001690 Citrullus lanatus HOM05D005147 ORTHO05D006132 7.1e-85 318.9 214 71.0
Zm00001eb321590 Zea mays HOM05D005147 ORTHO05D006132 6.6e-83 312.4 221 67.0
Actinidia05852 Actinidia chinensis HOM05D005147 ORTHO05D006132 3.6e-81 306.6 213 69.0
Nitab4.5_0000798g0160 Nicotiana tabacum HOM05D005147 ORTHO05D006132 5.1e-75 286.2 242 59.1
Cre17.g707050 Chlamydomonas reinhardtii HOM05D005147 ORTHO05D006132 1.5e-63 248.1 562 33.3
HPP92_011449 Vanilla planifolia HOM05D005147 ORTHO05D006132 1.5e-63 248.1 178 69.7
CBR_g19604 Chara braunii HOM05D005147 ORTHO05D006132 2.3e-59 234.2 566 32.2
MCO16G453 Micromonas commoda HOM05D005147 ORTHO05D006132 2.6e-55 220.7 242 51.2
Zm00001eb058540 Zea mays HOM05D005147 ORTHO05D006132 4.9e-54 216.5 214 54.7
Zm00001eb092200 Zea mays HOM05D005147 ORTHO05D006132 3.7e-49 200.3 159 60.4
Nitab4.5_0015042g0010 Nicotiana tabacum HOM05D005147 ORTHO05D006132 1.2e-44 185.3 156 58.3
Haze_04614 Corylus avellana HOM05D005147 ORTHO05D006132 2.3e-43 181.0 180 55.0
ClCG04G001680 Citrullus lanatus HOM05D005147 ORTHO05D006132 2.7e-36 157.5 173 47.4
Migut.F02087 Erythranthe guttata HOM05D005147 ORTHO05D006132 6.1e-36 156.4 105 70.5
MBI07_g33483_MAGBIO Magnolia biondii HOM05D005147 ORTHO05D006132 6.7e-35 152.9 183 44.3
PRCOL_00001696 Prasinoderma coloniale HOM05D005147 ORTHO05D006132 1.5e-34 151.8 420 34.0
SEGI_04471 Sequoiadendron giganteum HOM05D005147 ORTHO05D006132 2.8e-33 147.5 117 63.2
Atru.chr10.460 Acer truncatum HOM05D005147 ORTHO05D006132 3.1e-32 144.1 105 64.8
Cc06_g17710 Coffea canephora HOM05D005147 ORTHO05D006132 2.6e-31 141.0 271 37.6
HPP92_011450 Vanilla planifolia HOM05D005147 ORTHO05D006132 2.9e-30 137.5 281 34.5
FAN17G2636 Fragaria x ananassa HOM05D005147 ORTHO05D006132 8.5e-30 136.0 94 67.0
FAN16G1629 Fragaria x ananassa HOM05D000071 ORTHO05D006132 1.1e-29 135.6 94 68.1
Cfa026444 Carpinus fangiana HOM05D005147 ORTHO05D006132 7.9e-28 129.4 427 27.4
Migut.F02088 Erythranthe guttata HOM05D005147 ORTHO05D006132 7.9e-28 129.4 156 46.8
C05p37710 Brassica napus HOM05D005147 ORTHO05D006132 1.0e-27 129.0 82 79.3
BcaC06g35123 Brassica carinata HOM05D005147 ORTHO05D006132 1.4e-27 128.6 80 78.8
BolC9t55790H Brassica oleracea HOM05D005147 ORTHO05D006132 2.6e-26 124.4 82 76.8
BraA09t41139Z Brassica rapa HOM05D005147 ORTHO05D006132 4.8e-25 120.2 80 73.8
A03p60580 Brassica napus HOM05D005147 ORTHO05D006132 1.4e-24 118.6 80 73.8
BcaC05g27774 Brassica carinata HOM05D005147 ORTHO05D006132 5.3e-24 116.7 80 72.5
A09p57480 Brassica napus HOM05D005147 ORTHO05D006132 7.0e-24 116.3 85 70.6
Haze_04617 Corylus avellana HOM05D005147 ORTHO05D006132 9.1e-24 115.9 70 74.3
C02p08230 Brassica napus HOM05D005147 ORTHO05D006132 4.5e-23 113.6 84 71.4
vmacro07058 Vaccinium macrocarpon HOM05D005147 ORTHO05D006132 1.7e-22 111.7 70 71.4
C02p46260 Brassica napus HOM05D005147 ORTHO05D006132 2.2e-22 111.3 77 72.7
Haze_04615 Corylus avellana HOM05D005147 ORTHO05D006132 8.5e-22 109.4 81 69.1
BcaC04g21654 Brassica carinata HOM05D000305 ORTHO05D000065 1.1e-21 109.0 69 75.4
FAN03G2245 Fragaria x ananassa HOM05D005147 ORTHO05D006132 2.3e-19 101.3 78 64.1
SHI13697 Sapria himalayana HOM05D005147 ORTHO05D000014 8.8e-19 99.4 59 69.5
Hma1.2p1_1029F.1_g249580 Hydrangea macrophylla HOM05D005147 ORTHO05D006132 1.5e-18 98.6 288 30.9
Hma1.2p1_3112F.1_g332769 Hydrangea macrophylla HOM05D005147 ORTHO05D006132 1.5e-18 98.6 288 30.9
SEGI_33004 Sequoiadendron giganteum HOM05D005147 ORTHO05D006132 4.8e-17 93.6 75 57.3
CDE09G1068 Ceratophyllum demersum HOM05D005147 ORTHO05D006132 6.5e-14 83.2 61 62.3
Cre07.g328400 Chlamydomonas reinhardtii HOM05D005264 ORTHO05D005428 2.2e-06 58.2 68 47.1


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