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Integrative Orthology Viewer:
TC0001G00080
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0001G00080 | 1 |  |
| Anchor point | TC0002G14370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | TC0001G03390 TC0001G00080 | 2 | ||
| Tree-based ortholog | TC0001G03390 TC0001G00080 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00059G00100 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00059G00100 | 1 | ||
| Arabidopsis lyrata | Anchor point | 1-to-many | AL7G05480 AL3G38120 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL5G20460 | 1 | ||
| Tree-based ortholog | many-to-1 | AL5G20460 | 1 | ||
| Arabidopsis thaliana | Anchor point | 1-to-many | AT4G35410 AT2G17380 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G50860 | 1 | ||
| Tree-based ortholog | many-to-1 | AT3G50860 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV6G15600 | 1 | |
| Tree-based ortholog | many-to-1 | BV6G15600 | 1 | ||
| Brassica rapa | Anchor point | 1-to-1 | BR10G17270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR03G41700 | 1 | ||
| Tree-based ortholog | many-to-1 | BR03G41700 | 1 | ||
| Capsella rubella | Anchor point | 1-to-1 | CRU_007G04580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_005G16100 | 1 | ||
| Tree-based ortholog | many-to-1 | CRU_005G16100 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00006G01100 | 1 | |
| Tree-based ortholog | many-to-1 | CP00006G01100 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR09G03100 | 1 | |
| Tree-based ortholog | many-to-many | CR07G02740 CR07G04690 | 2 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL07G06950 | 1 | |
| Tree-based ortholog | many-to-1 | CL07G06950 | 1 | ||
| Citrus sinensis | Anchor point | 1-to-1 | CS00023G02250 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00106G00180 | 1 | ||
| Tree-based ortholog | many-to-many | CS00002G05500 CS00106G00180 | 2 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00029G00050 | 1 | |
| Tree-based ortholog | many-to-1 | CM00029G00050 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0009G20670 | 1 | |
| Tree-based ortholog | many-to-1 | EG0009G20670 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV1G15610 | 1 | |
| Tree-based ortholog | many-to-1 | FV1G15610 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM16G25400 GM02G06350 | 2 | |
| Tree-based ortholog | many-to-many | GM02G06350 GM16G25400 | 2 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR08G06800 | 1 | |
| Tree-based ortholog | many-to-many | GR08G06800 GR03G01490 | 2 | ||
| Malus domestica | Anchor point | 1-to-1 | MD10G010440 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD00G312990 | 1 | ||
| Tree-based ortholog | many-to-1 | MD00G312990 | 1 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME07520G01730 | 1 | |
| Tree-based ortholog | many-to-1 | ME07520G01730 | 1 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT8G077600 | 1 | |
| Tree-based ortholog | many-to-1 | MT8G077600 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G12710 | 1 | |
| Tree-based ortholog | many-to-many | OS01G25110 OS03G12710 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL16G01110 | 1 | |
| Tree-based ortholog | many-to-1 | OL16G01110 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00128G00490 | 1 | |
| Tree-based ortholog | many-to-1 | PP00128G00490 | 1 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT07G02540 | 1 | |
| Tree-based ortholog | many-to-many | PT05G12290 PT07G02540 | 2 | ||
| Prunus persica | Anchor point | 1-to-1 | PPE_008G20030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G17560 | 1 | ||
| Tree-based ortholog | many-to-1 | PPE_007G17560 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29634G00930 | 1 | |
| Tree-based ortholog | many-to-1 | RC29634G00930 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL02G085240 | 1 | |
| Tree-based ortholog | many-to-1 | SL02G085240 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST02G028390 | 1 | |
| Tree-based ortholog | many-to-1 | ST02G028390 | 1 | ||
| Thellungiella parvula | Anchor point | 1-to-1 | TP7G33190 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G11360 | 1 | ||
| Tree-based ortholog | many-to-1 | TP5G11360 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV04G02190 | 1 | |
| Tree-based ortholog | many-to-1 | VV04G02190 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G16210 | 1 | |
| Tree-based ortholog | many-to-1 | ZM09G25290 | 1 |