PLAZA 3.0 Dicots gene overview : TC0001G00080

Gene: TC0001G00080 (Theobroma cacao)

Overview

Gene Identifier: TC0001G00080
Transcript Identifier: TC0001G00080.1
Gene Type: Coding gene
Location: scaffold_1 : 36800-38539 : negative

Family

Gene family: HOM03D000768
(182 genes in 30 species)
specific family
Duplication type: Block duplicate

Loading...please wait

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006810	IEA	InterPro	transport
GO:0015031	IEA	InterPro	protein transport
GO:0045184	IEA	PLAZA Homology	establishment of protein localization	HOM03D000768
GO:0008104	IEA	PLAZA Homology	protein localization	HOM03D000768
GO:0033036	IEA	PLAZA Homology	macromolecule localization	HOM03D000768

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0008565	IEA	InterPro	protein transporter activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0030123	IEA	InterPro	AP-3 adaptor complex
GO:0048475	IEA	PLAZA Homology	coated membrane	HOM03D000768
GO:0030117	IEA	PLAZA Homology	membrane coat	HOM03D000768

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR027155	AP-3 complex subunit sigma
IPR022775	AP complex, mu/sigma subunit
IPR016635	Adaptor protein complex, sigma subunit
IPR011012	Longin-like domain

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.