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Integrative Orthology Viewer:
PT17G08980
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT01G40780 PT17G08980 PT17G08990 | 3 |  |
| Best-Hits-and-Inparalogs(BHI)family | PT17G08980 | 1 | ||
| Tree-based ortholog | PT17G08980 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00003G04160 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00177G00320 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL6G15240 AL8G19510 | 2 | |
| Anchor point | N/A | AL6G15240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G15240 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL6G15240 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT5G15410 AT5G54250 | 2 | |
| Anchor point | N/A | AT5G15410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G15410 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT5G15410 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G42690 BV1G02730 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G02730 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV1G02730 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G15300 BR10G07880 BR10G19650 | 3 | |
| Anchor point | N/A | BR10G19650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G19650 | 1 | ||
| Tree-based ortholog | 1-to-1 | BR10G19650 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_006G13250 CRU_008G14230 | 2 | |
| Anchor point | N/A | CRU_006G13250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G13250 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_006G13250 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00012G00410 CP00014G01410 CP00014G01420 | 3 | |
| Anchor point | N/A | CP00014G01410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00014G01410 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00014G01410 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR17G02400 CR07G04460 CR12G14170 ... | 4 | |
| Citrullus lanatus | Orthologous gene family | many-to-many | CL07G06810 CL07G16280 CL11G14270 | 3 | |
| Anchor point | N/A | CL11G14270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G14270 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL11G14270 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00012G00700 CS00015G02200 CS00015G02210 | 3 | |
| Anchor point | N/A | CS00015G02200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00015G02210 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00015G02210 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00028G01540 CM00051G00630 | 2 | |
| Anchor point | N/A | CM00051G00630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00051G00630 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00051G00630 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G28520 EG0009G16680 EG0010G12020 | 3 | |
| Anchor point | N/A | EG0009G16680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G16680 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0009G16680 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV3G27790 FV6G43300 FV7G32220 | 3 | |
| Anchor point | N/A | FV6G43300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G43300 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV6G43300 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM06G42310 GM08G26340 GM12G16146 ... | 5 | |
| Anchor point | N/A | GM18G49890 GM08G26340 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G26340 GM18G49890 | 2 | ||
| Tree-based ortholog | 1-to-many | GM08G26340 GM18G49890 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR02G07660 GR06G01250 GR06G01260 ... | 4 | |
| Anchor point | N/A | GR12G05060 GR06G01250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G01260 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR12G05060 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ3G008870 LJ3G008890 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G012550 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ3G008890 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G018290 MD03G018990 MD07G016220 ... | 6 | |
| Anchor point | N/A | MD09G004360 MD17G004830 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD17G004830 | 1 | ||
| Tree-based ortholog | 1-to-many | MD09G004360 MD00G018290 MD00G444820 ... | 4 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME03000G00110 ME03741G01420 ME06609G00510 ... | 5 | |
| Anchor point | N/A | ME06609G00510 ME11341G01150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11341G01160 | 1 | ||
| Tree-based ortholog | 1-to-many | ME06609G00510 ME11341G01150 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT2G081110 MT7G012260 MT8G464570 | 3 | |
| Anchor point | N/A | MT7G012260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G012260 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT7G012260 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G57370 OS03G55100 OS05G42250 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G55100 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS03G55100 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00090G01280 PP00099G00110 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00099G00110 | 1 | ||
| Tree-based ortholog | 1-to-many | PP00189G00460 PP00090G01280 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_002G26120 PPE_003G23870 PPE_004G18320 | 3 | |
| Anchor point | N/A | PPE_003G23870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G23870 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_003G23870 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC28124G00010 RC29630G00010 RC30027G00100 | 3 | |
| Anchor point | N/A | RC28124G00010 RC29630G00010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28124G00010 | 1 | ||
| Tree-based ortholog | 1-to-many | RC28124G00010 RC29630G00010 | 2 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G088560 SL10G006800 SL12G005400 | 3 | |
| Anchor point | N/A | SL02G088560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G088560 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL02G088560 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST02G034320 ST10G007010 ST12G012440 | 3 | |
| Anchor point | N/A | ST02G034320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G034320 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST02G034320 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP6G16290 TP6G28680 | 2 | |
| Anchor point | N/A | TP6G28680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G28680 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP6G28680 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0004G09450 TC0004G09460 TC0007G06580 | 3 | |
| Anchor point | N/A | TC0004G09450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G09450 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0004G09450 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV19G03720 | 1 | |
| Anchor point | N/A | VV14G02790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G02790 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV14G02790 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G53300 ZM05G03970 ZM06G27780 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G03970 ZM01G53300 | 2 | ||
| Tree-based ortholog | 1-to-many | ZM01G53300 ZM05G03970 | 2 |