Gene: PT17G08980 (Populus trichocarpa)

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Gene Identifier
PT17G08980
Transcript Identifier
PT17G08980.1
Gene Type
Coding gene
Location
Chr17 : 10686111-10690576 : negative

Family

Gene family
HOM03D000120
(808 genes in 30 species)
specific family
Subfamily
ORTHO03D000486
(83 genes in 28 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
Putative cyclic nucleotide-gated ion channel
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.017G089800.1
idPAC:26985365

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007263ISOPLAZA Integrative Orthologynitric oxide mediated signal transductionAT5G15410
GO:0009626ISOPLAZA Integrative Orthologyplant-type hypersensitive responseAT5G15410
GO:0006952ISOPLAZA Integrative Orthologydefense responseAT5G15410
GO:0044765IEAPLAZA Homologysingle-organism transportHOM03D000120
GO:0051234IEAPLAZA Homologyestablishment of localizationHOM03D000120
GO:0055085IEAPLAZA Homologytransmembrane transportHOM03D000120
GO:0006810IEAPLAZA HomologytransportHOM03D000120
GO:0051179IEAPLAZA HomologylocalizationHOM03D000120
GO:0006811IEAPLAZA Homologyion transportHOM03D000120

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005262ISOPLAZA Integrative Orthologycalcium channel activityAT5G15410
GO:0005516ISOPLAZA Integrative Orthologycalmodulin bindingAT5G15410
GO:0005222ISOPLAZA Integrative Orthologyintracellular cAMP activated cation channel activityAT5G15410
GO:0005221ISOPLAZA Integrative Orthologyintracellular cyclic nucleotide activated cation channel activityAT5G15410
GO:0005242ISOPLAZA Integrative Orthologyinward rectifier potassium channel activityAT5G15410
GO:0005215IEAPLAZA Homologytransporter activityHOM03D000120
GO:0015075IEAPLAZA Homologyion transmembrane transporter activityHOM03D000120
GO:0022838IEAPLAZA Homologysubstrate-specific channel activityHOM03D000120
GO:0022857IEAPLAZA Homologytransmembrane transporter activityHOM03D000120
GO:0022803IEAPLAZA Homologypassive transmembrane transporter activityHOM03D000120
GO:0022891IEAPLAZA Homologysubstrate-specific transmembrane transporter activityHOM03D000120
GO:0022892IEAPLAZA Homologysubstrate-specific transporter activityHOM03D000120
GO:0005216IEAPLAZA Homologyion channel activityHOM03D000120
GO:0015267IEAPLAZA Homologychannel activityHOM03D000120

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAPLAZA HomologymembraneHOM03D000120

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000595Cyclic nucleotide-binding domain
IPR018490Cyclic nucleotide-binding-like
IPR014710RmlC-like jelly roll fold

Mapman id Description
34.22transport.cyclic nucleotide or calcium regulated channels
No SignalP domains detected for this gene.