Integrative Orthology Viewer: PT15G05310 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT12G06130 PT15G05310 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | PT15G05310 PT12G06130 | 2 | ||
Tree-based ortholog | PT15G05310 PT12G06130 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00110G00090 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00110G00090 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00110G00090 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G19360 | 1 | |
Anchor point | N/A | AL1G19360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL1G19360 | 1 | ||
Tree-based ortholog | many-to-1 | AL1G19360 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G18450 | 1 | |
Anchor point | N/A | AT1G18450 AT1G73910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G18450 | 1 | ||
Tree-based ortholog | many-to-many | AT1G73910 AT1G18450 | 2 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV5G05170 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV5G05170 | 1 | ||
Tree-based ortholog | many-to-1 | BV5G05170 | 1 | ||
Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR03G03730 | 1 | |
Tree-based ortholog | many-to-many | BR07G16700 BR09G40320 | 2 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G17270 CRU_001G17300 | 2 | |
Anchor point | N/A | CRU_001G17270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_001G17300 | 1 | ||
Tree-based ortholog | many-to-many | CRU_002G19510 CRU_001G17270 CRU_001G17300 | 3 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00013G00250 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00013G00250 | 1 | ||
Tree-based ortholog | many-to-1 | CP00013G00250 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR13G07280 | 1 | |
Tree-based ortholog | many-to-1 | CR06G00100 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL06G15490 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL06G15490 | 1 | ||
Tree-based ortholog | many-to-1 | CL06G15490 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00035G00560 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00035G00560 | 1 | ||
Tree-based ortholog | many-to-1 | CS00035G00560 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00030G02240 | 1 | |
Anchor point | N/A | CM00030G02240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00030G02240 | 1 | ||
Tree-based ortholog | many-to-1 | CM00030G02240 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G06080 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G06080 | 1 | ||
Tree-based ortholog | many-to-1 | EG0002G06080 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G38730 FV3G19800 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV3G19800 | 1 | ||
Tree-based ortholog | many-to-many | FV0G38730 FV3G19800 | 2 | ||
Glycine max | Orthologous gene family | many-to-many | GM03G25550 GM07G13230 GM08G04490 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM03G25550 GM07G13230 | 2 | ||
Tree-based ortholog | many-to-many | GM07G13230 GM03G25550 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR13G24980 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR13G24980 | 1 | ||
Tree-based ortholog | many-to-1 | GR13G24980 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G015590 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G015590 | 1 | ||
Tree-based ortholog | many-to-1 | LJ2G015590 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD11G024700 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD11G024700 | 1 | ||
Tree-based ortholog | many-to-many | MD03G021390 MD11G024700 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME06446G00230 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME06446G00230 | 1 | ||
Tree-based ortholog | many-to-1 | ME06446G00230 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT5G066400 MT8G464900 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT8G464900 MT5G066400 | 2 | ||
Tree-based ortholog | many-to-many | MT8G464900 MT5G066400 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS08G04280 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS08G04280 | 1 | ||
Tree-based ortholog | many-to-1 | OS08G04280 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL04G02560 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL04G02560 | 1 | ||
Tree-based ortholog | many-to-1 | OL04G02560 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00066G01030 PP00238G00340 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00066G01030 PP00238G00340 | 2 | ||
Tree-based ortholog | many-to-many | PP00066G01030 PP00238G00340 | 2 | ||
Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_004G14710 | 1 | |
Tree-based ortholog | many-to-1 | PPE_004G14710 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30174G03830 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30174G03830 | 1 | ||
Tree-based ortholog | many-to-1 | RC30174G03830 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL12G037980 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL12G037980 | 1 | ||
Tree-based ortholog | many-to-1 | SL12G037980 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST12G020720 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST12G020720 | 1 | ||
Tree-based ortholog | many-to-1 | ST12G020720 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G29110 | 1 | |
Anchor point | N/A | TP1G16390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | TP1G16390 TP5G29110 | 2 | ||
Tree-based ortholog | many-to-many | TP5G29110 TP1G16390 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0009G21860 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0009G21860 | 1 | ||
Tree-based ortholog | many-to-1 | TC0009G21860 | 1 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV04G05680 | 1 | |
Tree-based ortholog | many-to-1 | VV17G05730 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM01G00770 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G00770 | 1 | ||
Tree-based ortholog | many-to-1 | ZM01G00770 | 1 |