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Integrative Orthology Viewer:
OS04G42140
(Oryza sativa ssp. japonica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Oryza sativa ssp. japonica | Orthologous gene family | OS02G39840 OS04G42140 | 2 |  |
| Anchor point | OS02G39840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | OS04G42140 | 1 | ||
| Tree-based ortholog | OS04G42140 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00009G00920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00009G00920 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00009G00920 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL4G03870 AL7G10860 AL8G23630 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G23630 | 1 | ||
| Tree-based ortholog | 1-to-many | AL4G03870 AL7G10860 | 2 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G24050 AT5G57870 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G57870 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT2G24050 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV8G14530 BV8G15110 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G15110 | 1 | ||
| Tree-based ortholog | 1-to-many | BV8G14520 BV8G14530 BV8G15110 | 3 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G06850 BR02G13200 BR03G51850 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G13200 | 1 | ||
| Tree-based ortholog | 1-to-many | BR01G06850 BR01G06780 BR03G51850 | 3 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_004G03120 CRU_007G09360 CRU_008G17930 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G17930 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_004G03120 CRU_007G09360 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00046G01810 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00046G01810 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G10280 | 1 | |
| Tree-based ortholog | 1-to-1 | CR12G10280 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL06G13100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G17410 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL06G13110 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00025G01300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00048G00020 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00025G01300 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00012G02220 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00029G03320 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0003G02090 EG0126G00030 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0003G02080 EG0003G02090 | 2 | ||
| Tree-based ortholog | 1-to-many | EG0003G02050 EG2446G00010 EG0003G02090 ... | 4 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV1G01920 FV2G52420 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G01920 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV2G52420 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G36680 GM04G23560 GM06G30880 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G36680 GM17G08030 | 2 | ||
| Tree-based ortholog | 1-to-many | GM06G30880 GM04G23560 | 2 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G00980 | 1 | |
| Tree-based ortholog | 1-to-many | GR13G10570 GR13G24130 GR09G00980 ... | 4 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G033670 | 1 | |
| Malus domestica | Orthologous gene family | many-to-many | MD00G084120 MD00G306030 MD00G324190 ... | 9 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD02G001340 MD00G438940 MD02G001260 ... | 4 | ||
| Tree-based ortholog | 1-to-many | MD01G020130 MD08G006260 MD00G084120 | 3 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME00876G00010 ME10813G00140 | 2 | |
| Tree-based ortholog | 1-to-many | ME10813G00140 ME00876G00010 | 2 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G130570 | 1 | |
| Tree-based ortholog | 1-to-1 | MT4G130570 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL03G00780 | 1 | |
| Tree-based ortholog | 1-to-many | OL19G00040 OL03G00780 | 2 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00034G01000 PP00034G01070 PP00065G00400 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00034G01000 PP00065G00440 PP00034G01070 ... | 5 | ||
| Tree-based ortholog | 1-to-many | PP00034G01000 PP00034G01070 PP00065G00440 ... | 5 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT06G26530 PT18G01760 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT18G10410 PT06G18210 | 2 | ||
| Tree-based ortholog | 1-to-many | PT06G26530 PT18G01760 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G40170 PPE_007G28110 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G28110 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_001G40170 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC27455G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC27455G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC27455G00010 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G005810 | 1 | |
| Tree-based ortholog | 1-to-many | SL12G009960 SL07G005780 SL07G005810 | 3 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST07G006180 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G006180 | 1 | ||
| Tree-based ortholog | 1-to-many | ST12G007910 ST07G006230 ST07G006180 | 3 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP6G19560 TP7G28590 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G19560 | 1 | ||
| Tree-based ortholog | 1-to-many | TP4G02960 TP7G28590 | 2 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0009G01430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G14570 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0009G01430 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV04G13230 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G13230 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV04G13230 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM02G10960 ZM10G19640 | 2 | |
| Anchor point | 1-to-many | ZM02G10960 ZM10G19640 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G10960 ZM10G19640 | 2 | ||
| Tree-based ortholog | 1-to-many | ZM02G10960 ZM10G19640 | 2 |