Gene: OS04G42140 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
OS04G42140
Transcript Identifier
OS04G42140.1
Gene Type
Coding gene
Location
4 : 24946655-24952068 : negative

Family

Gene family
HOM03D000855
(167 genes in 31 species)
specific family
Subfamily
ORTHO03D001402
(51 genes in 22 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
eukaryotic initiation factor iso-4F subunit p82-34, putative, expressed
Description
Eukaryotic translation initiation factor isoform 4G-1
Description (AnnoMine)
factor isoform 4G

Identifiers

Identifier Name
transcript_idLOC_OS04G42140.1
uniprotQ84PB3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0046740IMPGene Ontologytransport of virus in host, cell to cellGR_REF:111461
GO:0009615IMPGene Ontologyresponse to virusGR_REF:111461
GO:0006417IEAUniProtregulation of translation1 2 3 4 5 6

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003743IEA, ICUniProttranslation initiation factor activityGR_REF:110891 2 3 4 5 6
GO:0005515IEAInterProprotein binding
GO:0005488IEAInterProbinding
GO:0003723IEAInterProRNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016281ICGene Ontologyeukaryotic translation initiation factor 4F complexGR_REF:11089
GO:0009536RCAGene OntologyplastidGR_REF:7047
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G57870 AT2G24050
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G57870

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003891Initiation factor eIF-4 gamma, MA3
IPR003890MIF4G-like, type 3
IPR016021MIF4-like, type 1/2/3
IPR016024Armadillo-type fold

Mapman id Description
29.2.3protein.synthesis.initiation
No SignalP domains detected for this gene.