Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
GR08G13880
(Gossypium raimondii)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | GR01G14450 GR08G13880 GR07G12220 | 3 |  |
| Orthologous gene family | GR01G14450 GR07G12220 GR08G13880 | 3 | ||
| Tree-based ortholog | GR08G13880 GR05G11690 | 2 | ||
| Anchor point | GR01G14450 GR07G12220 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00045G01890 | 1 | |
| Orthologous gene family | many-to-1 | ATR_00045G01890 | 1 | ||
| Tree-based ortholog | many-to-1 | ATR_00045G01890 | 1 | ||
| Anchor point | many-to-1 | ATR_00045G01890 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL2G14020 | 1 | |
| Tree-based ortholog | many-to-many | AL2G14020 AL8G03200 AL1G32830 ... | 10 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G02560 | 1 | |
| Orthologous gene family | many-to-1 | AT1G02560 | 1 | ||
| Tree-based ortholog | many-to-1 | AT1G02560 | 1 | ||
| Anchor point | many-to-1 | AT1G02560 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV4G03210 | 1 | |
| Orthologous gene family | many-to-1 | BV4G03210 | 1 | ||
| Tree-based ortholog | many-to-1 | BV4G03210 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR10G05450 | 1 | |
| Orthologous gene family | many-to-many | BR08G32010 BR10G05450 | 2 | ||
| Tree-based ortholog | many-to-many | BR08G32010 BR10G05450 | 2 | ||
| Anchor point | many-to-many | BR10G05450 BR08G32010 | 2 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_001G01470 | 1 | |
| Orthologous gene family | many-to-1 | CRU_001G01470 | 1 | ||
| Tree-based ortholog | many-to-1 | CRU_001G01470 | 1 | ||
| Anchor point | many-to-many | CRU_001G01470 CRU_001G08010 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00018G00520 | 1 | |
| Orthologous gene family | many-to-1 | CP00018G00520 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00018G00520 | 1 | ||
| Anchor point | many-to-many | CP00116G00120 CP00018G00520 | 2 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR12G02710 | 1 | |
| Orthologous gene family | many-to-1 | CR12G02710 | 1 | ||
| Tree-based ortholog | many-to-1 | CR12G02710 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL10G09710 | 1 | |
| Orthologous gene family | many-to-1 | CL10G09710 | 1 | ||
| Tree-based ortholog | many-to-1 | CL10G09710 | 1 | ||
| Anchor point | many-to-1 | CL10G09710 | 1 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00001G06520 | 1 | |
| Orthologous gene family | many-to-many | CS00001G06520 CS00004G04900 | 2 | ||
| Tree-based ortholog | many-to-many | CS00004G04900 CS00001G06520 | 2 | ||
| Anchor point | many-to-many | CS00001G06520 CS00004G04900 | 2 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00031G03870 | 1 | |
| Orthologous gene family | many-to-1 | CM00031G03870 | 1 | ||
| Tree-based ortholog | many-to-1 | CM00031G03870 | 1 | ||
| Anchor point | many-to-1 | CM00031G03870 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0008G08650 | 1 | |
| Orthologous gene family | many-to-1 | EG0008G08650 | 1 | ||
| Tree-based ortholog | many-to-1 | EG0008G08650 | 1 | ||
| Anchor point | many-to-1 | EG0008G08650 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G34550 | 1 | |
| Orthologous gene family | many-to-1 | FV5G34550 | 1 | ||
| Tree-based ortholog | many-to-1 | FV5G34550 | 1 | ||
| Anchor point | many-to-1 | FV5G34550 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM10G01550 GM02G01510 | 2 | |
| Orthologous gene family | many-to-many | GM02G01510 GM10G01550 | 2 | ||
| Tree-based ortholog | many-to-1 | GM03G37880 | 1 | ||
| Anchor point | many-to-many | GM10G01550 GM19G40481 GM03G37880 ... | 4 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ5G027400 | 1 | |
| Orthologous gene family | many-to-1 | LJ5G027400 | 1 | ||
| Tree-based ortholog | many-to-1 | LJ5G027400 | 1 | ||
| Anchor point | many-to-1 | LJ5G027400 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD11G028630 MD03G024820 | 2 | |
| Orthologous gene family | many-to-many | MD03G024820 MD11G028630 | 2 | ||
| Tree-based ortholog | many-to-1 | MD03G024820 | 1 | ||
| Anchor point | many-to-1 | MD11G028630 | 1 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME07571G01150 | 1 | |
| Orthologous gene family | many-to-many | ME07301G00420 ME07571G01150 | 2 | ||
| Tree-based ortholog | many-to-many | ME07301G00420 ME07571G01150 | 2 | ||
| Anchor point | many-to-many | ME07571G01150 ME07301G00420 | 2 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT7G109610 | 1 | |
| Orthologous gene family | many-to-many | MT1G086940 MT7G109610 | 2 | ||
| Tree-based ortholog | many-to-many | MT7G109610 MT1G086940 | 2 | ||
| Anchor point | many-to-many | MT7G109610 MT1G086940 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G19510 | 1 | |
| Orthologous gene family | many-to-1 | OS03G19510 | 1 | ||
| Tree-based ortholog | many-to-1 | OS03G19510 | 1 | ||
| Anchor point | many-to-1 | OS03G19510 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL02G02410 | 1 | |
| Orthologous gene family | many-to-1 | OL02G02410 | 1 | ||
| Tree-based ortholog | many-to-1 | OL02G02410 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00049G00870 PP00212G00050 | 2 | |
| Orthologous gene family | many-to-many | PP00049G00870 PP00212G00050 | 2 | ||
| Tree-based ortholog | many-to-many | PP00049G00870 PP00212G00050 PP00016G01130 | 3 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT02G19520 PT14G11970 | 2 | |
| Orthologous gene family | many-to-many | PT02G19520 PT14G11970 | 2 | ||
| Tree-based ortholog | many-to-many | PT14G11970 PT02G19520 | 2 | ||
| Anchor point | many-to-many | PT14G11970 PT02G19520 | 2 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_008G27790 | 1 | |
| Orthologous gene family | many-to-1 | PPE_008G27790 | 1 | ||
| Tree-based ortholog | many-to-1 | PPE_008G27790 | 1 | ||
| Anchor point | many-to-1 | PPE_008G27790 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30076G02080 | 1 | |
| Orthologous gene family | many-to-1 | RC30076G02080 | 1 | ||
| Tree-based ortholog | many-to-1 | RC30076G02080 | 1 | ||
| Anchor point | many-to-1 | RC30076G02080 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G100520 | 1 | |
| Orthologous gene family | many-to-1 | SL01G100520 | 1 | ||
| Tree-based ortholog | many-to-1 | SL01G100520 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G038340 | 1 | |
| Orthologous gene family | many-to-1 | ST01G038340 | 1 | ||
| Tree-based ortholog | many-to-1 | ST01G038340 | 1 | ||
| Anchor point | many-to-1 | ST01G038340 | 1 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP1G01580 | 1 | |
| Orthologous gene family | many-to-1 | TP1G01580 | 1 | ||
| Tree-based ortholog | many-to-1 | TP1G01580 | 1 | ||
| Anchor point | many-to-1 | TP1G01580 | 1 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0001G31280 | 1 | |
| Orthologous gene family | many-to-1 | TC0001G31280 | 1 | ||
| Tree-based ortholog | many-to-1 | TC0001G31280 | 1 | ||
| Anchor point | many-to-1 | TC0001G31280 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV07G09340 | 1 | |
| Orthologous gene family | many-to-1 | VV07G09340 | 1 | ||
| Tree-based ortholog | many-to-1 | VV07G09340 | 1 | ||
| Anchor point | many-to-1 | VV07G09340 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM08G08850 | 1 | |
| Tree-based ortholog | many-to-many | ZM08G08850 ZM01G22960 ZM01G15160 ... | 16 |