Gene: AT1G02560 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G02560
Transcript Identifier
AT1G02560.1
Gene Type
Coding gene
Location
1 : 538000-539805 : positive

Family

Gene family
HOM03D000229
(458 genes in 31 species)
specific family
Subfamily
ORTHO03D002895
(39 genes in 29 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
nuclear encoded CLP protease 5
Curated Summary
One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).
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Identifiers

Identifier Name
aliasnuclear encoded CLP protease 5
aliasNCLPP1
aliasNCLPP5
aliasCLPP5
aliasNUCLEAR-ENCODED CLPP 1
aliasNUCLEAR CLPP 5
uniprotQ9S834

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000023RCAGene Ontologymaltose metabolic process1
GO:0019252RCAGene Ontologystarch biosynthetic process1
GO:0006508IEAUniProtproteolysis1 2 3 4 5 6 7 8
GO:0019538IEAPLAZA Homologyprotein metabolic processHOM03D000229

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004252IEAUniProtserine-type endopeptidase activity1 2 3 4 5 6 7 8
GO:0005524IEAUniProtATP binding1 2 3 4 5 6 7 8
GO:0070011IEAPLAZA Homologypeptidase activity, acting on L-amino acid peptidesHOM03D000229
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000229
GO:0004175IEAPLAZA Homologyendopeptidase activityHOM03D000229
GO:0008236IEAPLAZA Homologyserine-type peptidase activityHOM03D000229
GO:0008233IEAPLAZA Homologypeptidase activityHOM03D000229
GO:0017171IEAPLAZA Homologyserine hydrolase activityHOM03D000229

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507IDA, ISMGene Ontologychloroplast1 2
GO:0009534IDAUniProtchloroplast thylakoid1 2 3 4 5 6 7 8 9
GO:0009570IDAGene Ontologychloroplast stroma1
GO:0009840IDAUniProtchloroplastic endopeptidase Clp complex1 2 3 4 5 6 7 8 9
GO:0009941IDAUniProtchloroplast envelope1 2 3 4 5 6 7 8 9
GO:0009532IDAGene Ontologyplastid stroma1
GO:0009579IDAGene Ontologythylakoid1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR018215ClpP, active site
IPR001907ClpP
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepA

Mapman id Description
29.5.5protein.degradation.serine protease
No SignalP domains detected for this gene.