Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
GM16G00900
(Glycine max)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Glycine max | Orthologous gene family | GM07G04186 GM16G00900 | 2 |  |
| Tree-based ortholog | GM07G04186 GM16G00900 | 2 | ||
| Anchor point | GM07G04186 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | GM16G00900 GM07G04186 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00119G00860 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00119G00860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00119G00860 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | many-to-1 | AL1G17670 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL1G17670 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G19120 AT4G30100 | 2 | |
| Tree-based ortholog | many-to-many | AT4G30100 AT2G19120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G30100 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV0G33740 | 1 | |
| Tree-based ortholog | many-to-1 | BV0G33740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G33740 | 1 | ||
| Brassica rapa | Tree-based ortholog | many-to-1 | BR09G46990 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR03G51280 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_003G32100 CRU_007G09950 | 2 | |
| Tree-based ortholog | many-to-many | CRU_007G09950 CRU_003G32100 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_007G09950 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00066G00740 | 1 | |
| Tree-based ortholog | many-to-1 | CP00066G00740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00066G00740 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR03G10180 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR06G03480 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL11G09500 | 1 | |
| Tree-based ortholog | many-to-1 | CL11G09500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL11G09500 | 1 | ||
| Citrus sinensis | Tree-based ortholog | many-to-1 | CS00114G00160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00114G00150 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00013G00590 | 1 | |
| Tree-based ortholog | many-to-1 | CM00013G00590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00013G00590 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0005G16490 | 1 | |
| Tree-based ortholog | many-to-many | EG0005G16490 EG0005G15580 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0005G16490 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV5G19010 | 1 | |
| Tree-based ortholog | many-to-1 | FV5G19010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G19010 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR09G23920 GR09G28210 | 2 | |
| Tree-based ortholog | many-to-many | GR09G28210 GR09G23920 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR09G23920 | 1 | ||
| Lotus japonicus | Tree-based ortholog | many-to-1 | LJ4G005130 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G005130 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD08G018160 | 1 | |
| Tree-based ortholog | many-to-many | MD00G356420 MD08G018160 MD01G002640 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD08G018160 MD01G002640 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME01945G00150 ME06825G00390 | 2 | |
| Tree-based ortholog | many-to-many | ME06825G00390 ME01945G00150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME06825G00390 ME01945G00150 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT8G020390 | 1 | |
| Tree-based ortholog | many-to-1 | MT8G020390 | 1 | ||
| Anchor point | 1-to-1 | MT8G020390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT8G020390 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS04G34670 OS03G32526 OS06G20500 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS03G32526 OS06G20500 OS04G34670 | 3 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-many | OL02G04750 OL02G04760 | 2 | |
| Tree-based ortholog | many-to-1 | OL08G04270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL02G04760 OL02G04750 | 2 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-1 | PP00234G00420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00234G00420 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G09350 PT05G16830 | 2 | |
| Tree-based ortholog | many-to-many | PT02G09350 PT05G16830 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT05G16830 PT02G09350 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_001G51720 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_001G51720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_001G51720 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29908G01480 | 1 | |
| Tree-based ortholog | many-to-1 | RC29908G01480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29908G01480 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL04G072830 | 1 | |
| Tree-based ortholog | many-to-1 | SL04G072830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL04G072830 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST04G027040 | 1 | |
| Tree-based ortholog | many-to-1 | ST04G027040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST04G027040 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP7G27950 | 1 | |
| Tree-based ortholog | many-to-1 | TP7G27950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP7G27950 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0008G10690 | 1 | |
| Tree-based ortholog | many-to-1 | TC0008G10690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0008G10690 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-1 | VV18G03300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV18G03300 | 1 | ||
| Zea mays | Tree-based ortholog | many-to-1 | ZM01G23770 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G23770 | 1 |