Gene: LJ4G005130 (Lotus japonicus)

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Gene Identifier
LJ4G005130
Transcript Identifier
LJ4G005130.1
Gene Type
Coding gene
Location
chr4 : 3896690-3904943 : positive

Family

Gene family
HOM03D000186
(550 genes in 31 species)
specific family
Subfamily
ORTHO03D002203
(43 genes in 31 species)
specific family

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Descriptions

Description (AnnoMine)
Probable helicase MAGATAMA 3
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
namechr4.CM0337.320.r2.m

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009863ISOPLAZA Integrative Orthologysalicylic acid mediated signaling pathwayAT5G47010
GO:0009611ISOPLAZA Integrative Orthologyresponse to woundingAT5G47010
GO:0009867ISOPLAZA Integrative Orthologyjasmonic acid mediated signaling pathwayAT5G47010
GO:0048571ISOPLAZA Integrative Orthologylong-day photoperiodismAT5G47010
GO:0009744ISOPLAZA Integrative Orthologyresponse to sucroseAT5G47010
GO:0042742ISOPLAZA Integrative Orthologydefense response to bacteriumAT5G47010
GO:0000184ISOPLAZA Integrative Orthologynuclear-transcribed mRNA catabolic process, nonsense-mediated decayAT5G47010
GO:0016246ISOPLAZA Integrative OrthologyRNA interferenceAT5G47010
GO:0010182ISOPLAZA Integrative Orthologysugar mediated signaling pathwayAT5G47010
GO:0010183ISOPLAZA Integrative Orthologypollen tube guidanceAT4G15570
GO:0009875ISOPLAZA Integrative Orthologypollen-pistil interactionAT4G15570
GO:0009553ISOPLAZA Integrative Orthologyembryo sac developmentAT4G15570

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008266ISOPLAZA Integrative Orthologypoly(U) RNA bindingAT1G16800
GO:0017111IEAPLAZA Homologynucleoside-triphosphatase activityHOM03D000186
GO:0003677IEAPLAZA HomologyDNA bindingHOM03D000186
GO:0005524IEAPLAZA HomologyATP bindingHOM03D000186

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000932ISOPLAZA Integrative Orthologycytoplasmic mRNA processing bodyAT5G47010
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G47010
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT5G47010 AT4G30100 AT2G19120
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT5G47010
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT5G47010
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT5G35970
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G35970
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT5G35970

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR026852Probable helicase MAGATAMA 3

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.