Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CS00020G00090
(Citrus sinensis)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Citrus sinensis | Orthologous gene family | CS00020G00090 | 1 |  |
| Tree-based ortholog | CS00020G00090 CS00020G00070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | CS00020G00070 CS00020G00090 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | many-to-1 | ATR_00049G00350 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00049G00350 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | many-to-1 | AL8G29900 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL8G29900 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | many-to-1 | AT5G63310 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G63310 | 1 | ||
| Beta vulgaris | Tree-based ortholog | many-to-1 | BV0G12970 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G12970 | 1 | ||
| Brassica rapa | Tree-based ortholog | many-to-1 | BR06G21400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR06G21400 | 1 | ||
| Capsella rubella | Tree-based ortholog | many-to-1 | CRU_008G23400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_008G23400 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP00004G00780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00004G00780 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR07G03210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR07G03210 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | many-to-1 | CL03G03400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL03G03400 | 1 | ||
| Cucumis melo | Tree-based ortholog | many-to-1 | CM00001G04380 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00001G04380 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | many-to-1 | EG0011G23010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0011G23010 | 1 | ||
| Fragaria vesca | Tree-based ortholog | many-to-1 | FV0G48840 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G48840 | 1 | ||
| Glycine max | Tree-based ortholog | many-to-many | GM07G29046 GM20G08845 GM14G33381 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM17G13670 GM20G08845 GM05G03010 ... | 4 | ||
| Gossypium raimondii | Tree-based ortholog | many-to-1 | GR06G27070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR06G27070 | 1 | ||
| Lotus japonicus | Tree-based ortholog | many-to-1 | LJ4G026290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G026290 | 1 | ||
| Malus domestica | Tree-based ortholog | many-to-many | MD14G015800 MD00G194040 MD00G234430 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD00G234430 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME03056G00020 ME10899G00280 | 2 | |
| Tree-based ortholog | many-to-many | ME03056G00020 ME10899G00280 ME12794G00030 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME12794G00030 | 1 | ||
| Medicago truncatula | Tree-based ortholog | many-to-1 | MT4G104030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G104030 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-1 | OS12G36194 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS12G36194 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL11G03100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL11G03100 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-many | PP00074G00140 PP00056G00440 PP00005G00840 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00005G00840 PP00056G00440 | 2 | ||
| Populus trichocarpa | Tree-based ortholog | many-to-1 | PT12G09380 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT12G09380 | 1 | ||
| Prunus persica | Tree-based ortholog | many-to-1 | PPE_005G16300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_005G16300 | 1 | ||
| Ricinus communis | Tree-based ortholog | many-to-1 | RC30147G04690 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30147G04690 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | many-to-many | SL03G110960 SL06G071960 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G110960 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | many-to-many | ST03G024130 ST06G029050 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST06G029050 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | many-to-1 | TP2G26430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP2G26430 | 1 | ||
| Theobroma cacao | Tree-based ortholog | many-to-1 | TC0003G12660 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0003G12660 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-1 | VV17G00070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV17G00070 | 1 | ||
| Zea mays | Tree-based ortholog | many-to-1 | ZM10G04790 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM10G04790 | 1 |