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Integrative Orthology Viewer:
ATR_00175G00230
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00175G00230 | 1 |  |
| Tree-based ortholog | ATR_00175G00230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00175G00230 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL8G26720 | 1 | |
| Tree-based ortholog | 1-to-many | AL6G02280 AL3G09970 AL8G26720 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G26720 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT5G60580 | 1 | |
| Tree-based ortholog | 1-to-many | AT5G03180 AT3G09760 AT5G60580 | 3 | ||
| Anchor point | N/A | AT5G60580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G60580 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV9G12000 | 1 | |
| Tree-based ortholog | 1-to-many | BV7G14150 BV9G12000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G14150 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR02G11530 BR10G13130 | 2 | |
| Tree-based ortholog | 1-to-many | BR02G03200 BR05G32520 BR05G32510 ... | 5 | ||
| Anchor point | N/A | BR10G13130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G11530 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_008G20650 | 1 | |
| Tree-based ortholog | 1-to-many | CRU_006G01990 CRU_003G08470 CRU_008G20650 | 3 | ||
| Anchor point | N/A | CRU_008G20650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G20650 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00216G00140 | 1 | |
| Tree-based ortholog | 1-to-many | CP00226G00050 CP00216G00140 | 2 | ||
| Anchor point | N/A | CP00216G00140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00216G00140 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR02G07720 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G07720 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL03G02230 | 1 | |
| Tree-based ortholog | 1-to-many | CL10G18370 CL02G21250 CL03G02230 | 3 | ||
| Anchor point | N/A | CL03G02230 CL02G21250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G02230 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00014G02130 | 1 | |
| Tree-based ortholog | 1-to-many | CS00446G00030 CS00014G02130 | 2 | ||
| Anchor point | N/A | CS00014G02130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00014G02130 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00082G00950 | 1 | |
| Tree-based ortholog | 1-to-many | CM00011G02600 CM00082G00950 CM00004G04120 | 3 | ||
| Anchor point | N/A | CM00082G00950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00004G04120 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0002G20090 EG0010G08230 | 2 | |
| Tree-based ortholog | 1-to-many | EG0011G27290 EG0010G08230 EG0002G20090 | 3 | ||
| Anchor point | N/A | EG0002G20090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G27290 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV3G37830 | 1 | |
| Tree-based ortholog | 1-to-many | FV6G48600 FV3G37830 | 2 | ||
| Anchor point | N/A | FV3G37830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G37830 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM11G20650 GM12G07290 GM12G29600 ... | 4 | |
| Tree-based ortholog | 1-to-many | GM19G36490 GM03G33750 GM13G20250 ... | 8 | ||
| Anchor point | N/A | GM12G29600 GM12G07290 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G20650 GM12G07290 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR03G14110 GR04G22850 GR09G10630 | 3 | |
| Tree-based ortholog | 1-to-many | GR02G24860 GR09G10630 GR03G14110 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G22850 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ3G044250 | 1 | |
| Tree-based ortholog | 1-to-many | LJ5G010740 LJ3G044250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G010740 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G275170 MD03G008810 | 2 | |
| Tree-based ortholog | 1-to-many | MD04G007380 MD04G007360 MD12G011090 ... | 5 | ||
| Anchor point | N/A | MD03G008810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD04G007380 MD04G007360 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME02960G00630 ME06327G00180 | 2 | |
| Tree-based ortholog | 1-to-many | ME02960G00630 ME03750G01000 ME06327G00180 | 3 | ||
| Anchor point | N/A | ME06327G00180 ME03750G01000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03750G01000 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT2G094130 MT4G059540 | 2 | |
| Tree-based ortholog | 1-to-many | MT1G064710 MT2G094130 MT4G059540 | 3 | ||
| Anchor point | N/A | MT2G094130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G059540 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS06G23274 OS04G01490 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G46366 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL05G00750 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL05G00750 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00024G00860 | 1 | |
| Tree-based ortholog | 1-to-many | PP00003G02540 PP00085G00710 PP00024G00860 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00024G00860 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT09G01330 | 1 | |
| Tree-based ortholog | 1-to-many | PT06G12900 PT09G01330 | 2 | ||
| Anchor point | N/A | PT09G01330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT09G01330 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G24630 | 1 | |
| Tree-based ortholog | 1-to-many | PPE_006G24630 PPE_006G09920 | 2 | ||
| Anchor point | N/A | PPE_006G09920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G09920 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30078G01340 | 1 | |
| Tree-based ortholog | 1-to-many | RC30078G01340 RC28076G00100 | 2 | ||
| Anchor point | N/A | RC28076G00100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28076G00100 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-many | SL06G016770 SL11G069350 | 2 | |
| Tree-based ortholog | 1-to-many | SL09G007680 SL06G016770 SL11G069350 | 3 | ||
| Anchor point | N/A | SL11G069350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G069350 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST06G010430 ST11G026210 | 2 | |
| Tree-based ortholog | 1-to-many | ST09G007310 ST06G010430 ST11G026210 | 3 | ||
| Anchor point | N/A | ST11G026210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G026210 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP6G22150 | 1 | |
| Tree-based ortholog | 1-to-many | TP6G39540 TP3G08100 TP6G22150 | 3 | ||
| Anchor point | N/A | TP6G22150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G22150 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0009G33360 | 1 | |
| Tree-based ortholog | 1-to-many | TC0005G05550 TC0009G33360 | 2 | ||
| Anchor point | N/A | TC0009G33360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G33360 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-many | VV06G05310 VV08G02780 | 2 | |
| Tree-based ortholog | 1-to-many | VV08G02780 VV06G05310 | 2 | ||
| Anchor point | N/A | VV06G05310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G02780 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM05G31240 ZM10G13190 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G12660 | 1 |