PLAZA 3.0 Dicots gene overview : AL3G09970

Gene: AL3G09970 (Arabidopsis lyrata)

Overview

Gene Identifier: AL3G09970
Transcript Identifier: AL3G09970.1
Gene Type: Coding gene
Location: scaffold_3 : 3864339-3866872 : negative

Family

Gene family: HOM03D000929
(157 genes in 31 species)
specific family
Subfamily: ORTHO03D009641
(27 genes in 21 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description (AnnoMine): Probable E3 ubiquitin-protein ligase MARCH10

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	478298
GeneName	g478298
id	PAC:16036132

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0008270	IEA	InterPro	zinc ion binding

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR011016	Zinc finger, RING-CH-type
IPR013083	Zinc finger, RING/FYVE/PHD-type

Mapman id	Description
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING

No SignalP domains detected for this gene.