Integrative Orthology Viewer: ATR_00102G00470 (Amborella trichopoda)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | ATR_00039G00300 ATR_00102G00470 ATR_00102G00480 | 3 | |
Tree-based ortholog | ATR_00102G00480 ATR_00102G00470 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | ATR_00102G00480 ATR_00102G00470 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL6G13650 | 1 | |
Tree-based ortholog | many-to-1 | AL6G13650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL6G13650 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G13930 | 1 | |
Tree-based ortholog | many-to-1 | AT5G13930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G13930 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G65190 BV0G65200 BV0G65210 ... | 9 | |
Tree-based ortholog | many-to-many | BV6G12500 BV9G06940 BV0G65190 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV6G12500 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G06680 BR02G34950 BR03G05630 ... | 5 | |
Tree-based ortholog | many-to-many | BR00G02230 BR06G17520 BR10G20580 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR10G20580 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_007G05130 | 1 | |
Tree-based ortholog | many-to-1 | CRU_003G24380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_007G05130 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00059G01060 CP00070G00530 | 2 | |
Tree-based ortholog | many-to-many | CP00070G00530 CP00059G01060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00059G01060 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL00G04540 CL06G07530 | 2 | |
Tree-based ortholog | many-to-many | CL06G07530 CL00G04540 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL00G04540 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00004G01060 CS00220G00110 CS00288G00010 ... | 6 | |
Tree-based ortholog | many-to-many | CS00358G00040 CS01214G00020 CS00220G00110 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00358G00040 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00023G00290 | 1 | |
Tree-based ortholog | many-to-many | CM00023G00290 CM00519G00010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00023G00290 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0004G13050 EG0004G13070 EG0008G00810 ... | 9 | |
Tree-based ortholog | many-to-many | EG0008G31450 EG0008G00810 EG0009G13070 ... | 11 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0008G22910 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV2G30500 FV2G30510 FV7G02600 | 3 | |
Tree-based ortholog | many-to-many | FV7G02590 FV7G02600 FV2G30500 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | FV7G02590 FV7G02600 | 2 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G22880 GM01G43880 GM02G14450 ... | 13 | |
Tree-based ortholog | many-to-many | GM13G09640 GM19G27930 GM11G01350 ... | 16 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM08G11610 GM02G14450 GM08G11520 ... | 10 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR05G03510 GR06G00020 GR09G25090 ... | 6 | |
Tree-based ortholog | many-to-many | GR06G00020 GR05G03510 GR11G16130 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR11G16130 GR05G03510 GR11G16120 | 3 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G012650 LJ1G033940 LJ1G033950 ... | 14 | |
Tree-based ortholog | many-to-many | LJ1G012650 LJ1G052900 LJ3G008750 ... | 15 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | LJ4G040350 LJ4G040780 | 2 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G182230 MD00G258370 MD00G276470 ... | 5 | |
Tree-based ortholog | many-to-many | MD09G015370 MD00G258370 MD00G182230 ... | 16 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G258370 MD09G015370 MD09G015400 ... | 4 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01407G00010 ME01407G00020 ME02421G00300 ... | 7 | |
Tree-based ortholog | many-to-many | ME09526G00010 ME02688G00220 ME07378G00040 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME02421G00300 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G097910 MT1G097935 MT1G098140 ... | 21 | |
Tree-based ortholog | many-to-many | MT3G088675 MT7G084300 MT5G007713 ... | 23 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT3G083910 MT3G083920 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS07G11440 OS11G32650 | 2 | |
Tree-based ortholog | many-to-many | OS07G11440 OS11G32650 OS03G47000 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS11G32650 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00001G00040 PP00016G01990 PP00020G01380 ... | 17 | |
Tree-based ortholog | many-to-many | PP00463G00020 PP00463G00080 PP00001G00040 ... | 19 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00463G00020 PP00500G00010 PP00303G00020 ... | 14 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G02860 PT01G05150 PT01G05160 ... | 6 | |
Tree-based ortholog | many-to-many | PT14G14510 PT01G05150 PT01G05160 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT01G05160 PT01G05150 PT03G17680 ... | 4 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G00280 PPE_001G00290 PPE_004G25850 ... | 5 | |
Tree-based ortholog | many-to-many | PPE_082G00020 PPE_001G00290 PPE_082G00010 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PPE_001G00280 PPE_001G00290 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29904G00940 RC30131G00990 | 2 | |
Tree-based ortholog | many-to-many | RC29904G00940 RC30131G00990 RC29908G00270 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29904G00940 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL05G053170 SL05G053550 SL09G091510 ... | 4 | |
Tree-based ortholog | many-to-many | SL05G053550 SL09G091510 SL05G053170 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL09G091510 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST05G025840 ST05G026310 ST09G027860 ... | 9 | |
Tree-based ortholog | many-to-many | ST05G026310 ST09G027860 ST09G027870 ... | 10 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST09G027860 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G18980 TP6G30070 | 2 | |
Tree-based ortholog | many-to-many | TP6G30070 TP2G18980 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP6G30070 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0004G21370 TC0005G15010 TC0005G15020 ... | 4 | |
Tree-based ortholog | many-to-many | TC0004G04910 TC0004G21370 TC0008G13850 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0004G04910 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV14G13530 VV16G00180 VV16G00200 ... | 13 | |
Tree-based ortholog | many-to-many | VV14G13530 VV16G00180 VV16G00380 ... | 19 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV16G00320 VV16G00390 VV16G00280 ... | 6 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM02G42850 | 1 | |
Tree-based ortholog | many-to-1 | ZM02G42850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM02G42850 | 1 |