Gene: SL05G053550 (Solanum lycopersicum)

Overview top

Gene Identifier
SL05G053550
Transcript Identifier
SL05G053550.1
Gene Type
Coding gene
Location
ch05 : 62779503-62780953 : positive

Family

Gene family
HOM03D000336
(352 genes in 29 species)
specific family
Subfamily
ORTHO03D000106
(174 genes in 29 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Chalcone synthase (AHRD V1 ***- C5IWS6_NICAL)%3B contains Interpro domain(s) IPR011141 Polyketide synthase%2C type III
Description
Chalcone synthase 2
Description (AnnoMine)
Chalcone synthase

Identifiers

Identifier Name
pidSolyc05g053550.2.1
uniprotP23419

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152IEAGenome Projectmetabolic process
GO:0009058IEAGenome Projectbiosynthetic process
GO:0009813IEAUniProtflavonoid biosynthetic process1
GO:0006979ISOPLAZA Integrative Orthologyresponse to oxidative stressAT5G13930
GO:0009715ISOPLAZA Integrative Orthologychalcone biosynthetic processAT5G13930
GO:0009733ISOPLAZA Integrative Orthologyresponse to auxinAT5G13930
GO:0009629ISOPLAZA Integrative Orthologyresponse to gravityAT5G13930
GO:0009611ISOPLAZA Integrative Orthologyresponse to woundingAT5G13930
GO:0009753ISOPLAZA Integrative Orthologyresponse to jasmonic acidAT5G13930
GO:0031540ISOPLAZA Integrative Orthologyregulation of anthocyanin biosynthetic processAT5G13930
GO:0010224ISOPLAZA Integrative Orthologyresponse to UV-BAT5G13930
GO:0009926ISOPLAZA Integrative Orthologyauxin polar transportAT5G13930

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016746IEAGenome Projecttransferase activity, transferring acyl groups
GO:0003824IEAInterProcatalytic activity
GO:0016210IEAUniProtnaringenin-chalcone synthase activity1
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G13930
GO:0016740IEAPLAZA Homologytransferase activityHOM03D000336

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G13930
GO:0009705ISOPLAZA Integrative Orthologyplant-type vacuole membraneAT5G13930
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumAT5G13930

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016039Thiolase-like
IPR016038Thiolase-like, subgroup
IPR012328Chalcone/stilbene synthase, C-terminal
IPR001099Chalcone/stilbene synthase, N-terminal
IPR018088Chalcone/stilbene synthase, active site

Mapman id Description
16.8.2secondary metabolism.flavonoids.chalcones
No SignalP domains detected for this gene.