Integrative Orthology Viewer: AT5G57360 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G68050 AT2G18915 AT5G57360 | 3 | |
Tree-based ortholog | AT2G18915 AT5G57360 AT1G68050 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | AT5G57360 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | many-to-many | ATR_00019G03100 ATR_00176G00230 | 2 | |
Anchor point | N/A | ATR_00019G03100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00019G03100 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G16150 AL3G40850 AL8G23110 | 3 | |
Tree-based ortholog | many-to-many | AL1G26120 AL3G39580 AL2G16150 ... | 5 | ||
Anchor point | N/A | AL3G40850 AL8G23110 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G23110 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV6G03500 BV8G06380 | 2 | |
Tree-based ortholog | many-to-many | BV8G06380 BV6G03500 | 2 | ||
Anchor point | N/A | BV8G06380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G06380 | 1 | ||
Brassica rapa | Tree-based ortholog | many-to-many | BR07G01620 BR07G01630 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G01620 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_002G13660 CRU_003G31920 CRU_008G17400 | 3 | |
Tree-based ortholog | many-to-many | CRU_003G31920 CRU_008G17400 CRU_002G13660 | 3 | ||
Anchor point | N/A | CRU_008G17400 CRU_003G31920 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G17400 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP34279G00010 | 1 | |
Tree-based ortholog | many-to-many | CP00095G00480 CP34279G00010 | 2 | ||
Anchor point | N/A | CP00095G00480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00095G00480 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR13G02200 CR02G01610 | 2 | |
Citrullus lanatus | Orthologous gene family | many-to-1 | CL07G05240 | 1 | |
Tree-based ortholog | many-to-many | CL07G05240 CL11G06310 | 2 | ||
Anchor point | N/A | CL11G06310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G06320 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00058G00210 CS00475G00030 | 2 | |
Tree-based ortholog | many-to-1 | CS00058G00210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00475G00030 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00029G00330 | 1 | |
Tree-based ortholog | many-to-many | CM00029G00330 CM00003G01270 | 2 | ||
Anchor point | N/A | CM00003G01270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00003G01290 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0003G01130 EG0007G15850 | 2 | |
Tree-based ortholog | many-to-many | EG0003G01130 EG0007G15850 | 2 | ||
Anchor point | N/A | EG0003G01130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0003G01130 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV0G07740 | 1 | |
Tree-based ortholog | many-to-many | FV0G07740 FV4G03510 | 2 | ||
Anchor point | N/A | FV4G03500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G03500 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM05G34530 GM08G05130 GM09G06220 ... | 6 | |
Tree-based ortholog | many-to-many | GM05G34530 GM08G05130 GM17G06950 ... | 6 | ||
Anchor point | N/A | GM17G06950 GM15G17480 GM09G06220 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM17G06950 GM13G00860 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G16680 GR04G02740 GR08G16850 ... | 4 | |
Tree-based ortholog | many-to-many | GR02G16680 GR09G00440 GR08G16850 ... | 5 | ||
Anchor point | N/A | GR09G00440 GR04G02740 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G00440 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G050310 | 1 | |
Tree-based ortholog | many-to-many | LJ4G050310 LJ6G017750 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G050310 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G023720 MD10G000990 MD13G029300 | 3 | |
Tree-based ortholog | many-to-many | MD00G023720 MD10G000990 MD13G029300 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G023720 MD13G029300 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME09294G00230 ME10173G00850 | 2 | |
Tree-based ortholog | many-to-many | ME10173G00850 ME09294G00230 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME09294G00230 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G036510 MT8G105590 | 2 | |
Tree-based ortholog | many-to-many | MT8G105590 MT2G036510 | 2 | ||
Anchor point | N/A | MT2G036510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G036510 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G05700 OS06G47890 OS11G34460 | 3 | |
Tree-based ortholog | many-to-1 | OS06G47890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G47890 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL09G02030 | 1 | |
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00081G01120 | 1 | |
Populus trichocarpa | Orthologous gene family | many-to-many | PT06G16630 PT08G13520 PT10G10570 ... | 4 | |
Tree-based ortholog | many-to-many | PT18G09080 PT08G13520 PT06G16630 ... | 4 | ||
Anchor point | N/A | PT18G09080 PT06G16630 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT18G09080 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G34260 | 1 | |
Tree-based ortholog | many-to-many | PPE_001G07630 PPE_001G34260 | 2 | ||
Anchor point | N/A | PPE_001G07630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G07640 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC27647G00080 RC29639G00010 | 2 | |
Tree-based ortholog | many-to-many | RC27647G00080 RC29639G00010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29639G00010 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G005300 | 1 | |
Tree-based ortholog | many-to-many | SL07G017740 SL01G005300 | 2 | ||
Anchor point | N/A | SL07G017740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G017750 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G005120 | 1 | |
Tree-based ortholog | many-to-many | ST01G005120 ST07G010590 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G010570 | 1 | ||
Thellungiella parvula | Tree-based ortholog | many-to-1 | TP3G32390 | 1 | |
Anchor point | N/A | TP3G32390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G32390 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G29270 TC0009G17410 | 2 | |
Tree-based ortholog | many-to-many | TC0009G17410 TC0002G29270 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G17410 | 1 | ||
Vitis vinifera | Tree-based ortholog | many-to-many | VV01G05820 VV04G09410 | 2 | |
Anchor point | N/A | VV11G09190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G09410 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G43150 ZM04G34040 ZM05G19710 ... | 4 | |
Tree-based ortholog | many-to-many | ZM06G11060 ZM02G43150 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G11060 | 1 |