Integrative Orthology Viewer: AT5G48400 (Arabidopsis thaliana) top


Inparalogs

Organism Source Genes #genes Details
Arabidopsis thalianaOrthologous gene familyAT1G05200 AT1G42540 AT2G17260 ...11
Tree-based orthologAT5G48400 1
Anchor pointAT3G07520 1
Best-Hits-and-Inparalogs(BHI)familyAT5G48400 1

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-manyATR_00010G00990 ATR_00010G01010 ATR_00019G01780 ...10
Tree-based ortholog1-to-manyATR_00062G00300 ATR_00019G01800 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyATR_00019G01790 ATR_00019G01800 ATR_00023G02080 3
Arabidopsis lyrataOrthologous gene familymany-to-manyAL0G01540 AL1G04680 AL1G38370 ...16
Tree-based ortholog1-to-1AL5G06860 1
Anchor point1-to-manyAL8G11200 AL3G07940 2
Best-Hits-and-Inparalogs(BHI)family1-to-1AL8G11210 1
Beta vulgarisOrthologous gene familymany-to-manyBV0G15460 BV1G00920 BV6G13770 ...7
Tree-based ortholog1-to-1BV1G00920 1
Best-Hits-and-Inparalogs(BHI)family1-to-1BV0G15460 1
Brassica rapaOrthologous gene familymany-to-manyBR00G11730 BR00G11750 BR01G02990 ...18
Tree-based ortholog1-to-manyBR09G04570 BR02G34800 BR06G30690 ...6
Anchor point1-to-manyBR09G04570 BR06G30690 BR02G34800 3
Best-Hits-and-Inparalogs(BHI)family1-to-1BR02G34800 1
Capsella rubellaOrthologous gene familymany-to-manyCRU_001G04150 CRU_001G32590 CRU_002G06730 ...12
Tree-based ortholog1-to-manyCRU_008G07920 CRU_008G07910 2
Anchor point1-to-manyCRU_008G07910 CRU_003G06740 2
Best-Hits-and-Inparalogs(BHI)family1-to-1CRU_008G07910 1
Carica papayaOrthologous gene familymany-to-manyCP00008G02100 CP00026G01640 2
Tree-based ortholog1-to-manyCP00008G02080 CP00060G00160 2
Anchor point1-to-1CP00008G00440 1
Best-Hits-and-Inparalogs(BHI)family1-to-1CP00023G00400 1
Chlamydomonas reinhardtiiTree-based ortholog1-to-manyCR12G16760 CR16G08120 CR13G05360 3
Citrullus lanatusOrthologous gene familymany-to-manyCL01G21130 CL02G08640 CL02G08650 ...10
Tree-based ortholog1-to-1CL08G13670 1
Best-Hits-and-Inparalogs(BHI)family1-to-1CL07G12580 1
Citrus sinensisOrthologous gene familymany-to-manyCS00002G06880 CS00017G02330 CS00017G02350 ...12
Tree-based ortholog1-to-1CS00075G00020 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyCS00075G00030 CS00075G00020 2
Cucumis meloOrthologous gene familymany-to-manyCM00007G10130 CM00014G06930 CM00029G04260 ...6
Tree-based ortholog1-to-1CM00014G06920 1
Best-Hits-and-Inparalogs(BHI)family1-to-1CM00014G06940 1
Eucalyptus grandisOrthologous gene familymany-to-manyEG0003G01290 EG0003G02190 EG0003G02200 ...19
Tree-based ortholog1-to-1EG0003G01290 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyEG0003G01300 EG0692G00010 EG0670G00020 ...13
Fragaria vescaOrthologous gene familymany-to-manyFV0G44880 FV1G16410 FV1G20440 ...31
Tree-based ortholog1-to-manyFV7G33420 FV0G44880 FV0G28690 3
Best-Hits-and-Inparalogs(BHI)family1-to-manyFV7G19010 FV7G19000 2
Glycine maxOrthologous gene familymany-to-manyGM01G36210 GM04G01760 GM06G01860 ...17
Tree-based ortholog1-to-manyGM12G00210 GM04G43670 GM14G00200 3
Best-Hits-and-Inparalogs(BHI)family1-to-1GM07G35290 1
Gossypium raimondiiOrthologous gene familymany-to-manyGR01G22730 GR01G22740 GR01G22750 ...10
Tree-based ortholog1-to-manyGR01G22730 GR01G10150 GR01G22750 3
Anchor point1-to-manyGR01G22730 GR01G10140 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyGR01G22750 GR01G22740 GR01G22760 3
Lotus japonicusOrthologous gene familymany-to-manyLJ1G025560 LJ1G043950 2
Tree-based ortholog1-to-1LJ6G026070 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyLJ1G025520 LJ1G025540 2
Malus domesticaOrthologous gene familymany-to-manyMD00G167640 MD00G252240 MD00G287210 ...22
Tree-based ortholog1-to-manyMD00G374070 MD05G005090 MD00G027300 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-manyMD00G287210 MD02G022630 2
Manihot esculentaOrthologous gene familymany-to-manyME01895G00210 ME02040G00100 ME02943G01150 ...11
Tree-based ortholog1-to-1ME08873G00300 1
Best-Hits-and-Inparalogs(BHI)family1-to-1ME00847G02670 1
Medicago truncatulaOrthologous gene familymany-to-manyMT2G015260 MT2G088430 MT2G088450 ...7
Tree-based ortholog1-to-manyMT2G015290 MT2G015280 MT2G015310 3
Best-Hits-and-Inparalogs(BHI)family1-to-manyMT3G105595 MT3G105610 2
Oryza sativa ssp. japonicaOrthologous gene familymany-to-manyOS02G02540 OS04G49570 OS06G09130 ...5
Tree-based ortholog1-to-1OS09G26160 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyOS09G25990 OS09G25960 OS09G26000 3
Physcomitrella patensOrthologous gene familymany-to-1PP00056G00160 1
Tree-based ortholog1-to-1PP00253G00100 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyPP00056G00160 PP00253G00100 2
Populus trichocarpaOrthologous gene familymany-to-manyPT02G00740 PT02G22990 PT02G23000 ...10
Tree-based ortholog1-to-1PT18G01310 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyPT18G01150 PT18G01070 PT18G01320 ...18
Prunus persicaOrthologous gene familymany-to-manyPPE_001G40690 PPE_002G02990 PPE_002G10710 ...20
Tree-based ortholog1-to-manyPPE_002G10720 PPE_002G10760 PPE_002G10790 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-manyPPE_002G10790 PPE_002G10720 PPE_002G10760 ...4
Ricinus communisOrthologous gene familymany-to-manyRC29600G00110 RC29600G00120 RC29830G00820 ...7
Tree-based ortholog1-to-manyRC29600G00120 RC30170G07110 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyRC29848G00450 RC29848G00440 2
Solanum lycopersicumOrthologous gene familymany-to-manySL02G082480 SL04G082610 SL05G045650 ...5
Tree-based ortholog1-to-1SL06G063210 1
Best-Hits-and-Inparalogs(BHI)family1-to-1SL06G063200 1
Solanum tuberosumOrthologous gene familymany-to-manyST01G049860 ST02G025840 ST04G036090 ...6
Tree-based ortholog1-to-1ST06G022330 1
Best-Hits-and-Inparalogs(BHI)family1-to-1ST08G007730 1
Thellungiella parvulaOrthologous gene familymany-to-manyTP1G04050 TP1G37300 TP2G18760 ...7
Tree-based ortholog1-to-1TP2G18760 1
Anchor point1-to-1TP2G18760 1
Best-Hits-and-Inparalogs(BHI)family1-to-1TP2G18760 1
Theobroma cacaoOrthologous gene familymany-to-manyTC0001G00360 TC0001G00370 TC0001G20250 ...11
Tree-based ortholog1-to-1TC0001G20250 1
Anchor point1-to-1TC0001G20240 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyTC0001G20250 TC0001G20240 2
Vitis viniferaOrthologous gene familymany-to-manyVV03G03340 VV04G06300 VV04G06410 ...10
Tree-based ortholog1-to-manyVV11G08970 VV11G08960 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyVV11G08960 VV11G08970 2
Zea maysOrthologous gene familymany-to-manyZM02G30820 ZM02G36450 ZM05G13020 ...7
Tree-based ortholog1-to-1ZM05G42790 1
Best-Hits-and-Inparalogs(BHI)family1-to-1ZM07G14780 1
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