Gene: AT5G48400 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G48400
Transcript Identifier
AT5G48400.2
Gene Type
Coding gene
Location
5 : 19616244-19619246 : positive

Family

Gene family
HOM03D000111
(880 genes in 30 species)
specific family
Subfamily
ORTHO03D000017
(312 genes in 29 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description
Glutamate receptor family protein
Curated Summary
member of Putative ligand-gated ion channel subunit family
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Identifiers

Identifier Name
aliasGLUTAMATE RECEPTOR 1.2
aliasGLR1.2
aliasATGLR1.2
uniprotQ9LV72

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006874NASGene Ontologycellular calcium ion homeostasis1
GO:0009416NASGene Ontologyresponse to light stimulus1
GO:0006865RCAGene Ontologyamino acid transport1
GO:0016036RCAGene Ontologycellular response to phosphate starvation1
GO:0019375RCAGene Ontologygalactolipid biosynthetic process1
GO:0030003RCAGene Ontologycellular cation homeostasis1
GO:0042631RCAGene Ontologycellular response to water deprivation1
GO:0006810IEAInterProtransport
GO:0019722ISSUniProtcalcium-mediated signaling1 2 3
GO:0071230ISSUniProtcellular response to amino acid stimulus1 2 3
GO:0035235IEAUniProtionotropic glutamate receptor signaling pathway1 2 3
GO:0051234IEAPLAZA Homologyestablishment of localizationHOM03D000111
GO:0051179IEAPLAZA HomologylocalizationHOM03D000111

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005217ISSGene Ontologyintracellular ligand-gated ion channel activity1
GO:0005515IPIGene Ontologyprotein binding1
GO:0005215IEAInterProtransporter activity
GO:0005234IEAUniProtextracellular-glutamate-gated ion channel activity1 2 3
GO:0004970IEAUniProtionotropic glutamate receptor activity1 2 3
GO:0005262ISSUniProtcalcium channel activity1 2 3
GO:0008066ISSUniProtglutamate receptor activity1 2 3
GO:0005230IEAPLAZA Homologyextracellular ligand-gated ion channel activityHOM03D000111
GO:0005231IEAPLAZA Homologyexcitatory extracellular ligand-gated ion channel activityHOM03D000111
GO:0015075IEAPLAZA Homologyion transmembrane transporter activityHOM03D000111
GO:0060089IEAPLAZA Homologymolecular transducer activityHOM03D000111
GO:0022803IEAPLAZA Homologypassive transmembrane transporter activityHOM03D000111
GO:0022891IEAPLAZA Homologysubstrate-specific transmembrane transporter activityHOM03D000111
GO:0022892IEAPLAZA Homologysubstrate-specific transporter activityHOM03D000111
GO:0004872IEAPLAZA Homologyreceptor activityHOM03D000111
GO:0004871IEAPLAZA Homologysignal transducer activityHOM03D000111
GO:0015276IEAPLAZA Homologyligand-gated ion channel activityHOM03D000111
GO:0022839IEAPLAZA Homologyion gated channel activityHOM03D000111
GO:0022836IEAPLAZA Homologygated channel activityHOM03D000111
GO:0022838IEAPLAZA Homologysubstrate-specific channel activityHOM03D000111
GO:0022857IEAPLAZA Homologytransmembrane transporter activityHOM03D000111
GO:0038023IEAPLAZA Homologysignaling receptor activityHOM03D000111
GO:0022834IEAPLAZA Homologyligand-gated channel activityHOM03D000111
GO:0005216IEAPLAZA Homologyion channel activityHOM03D000111
GO:0015267IEAPLAZA Homologychannel activityHOM03D000111
GO:0004888IEAPLAZA Homologytransmembrane signaling receptor activityHOM03D000111

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576ISMGene Ontologyextracellular region1
GO:0016020IEAInterPromembrane
GO:0016021IEAUniProtintegral to membrane1 2 3
GO:0005886ISSUniProtplasma membrane1 2 3

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR028082Periplasmic binding protein-like I
IPR001638Extracellular solute-binding protein, family 3
IPR001320Ionotropic glutamate receptor
IPR001828Extracellular ligand-binding receptor

Mapman id Description
30.1signalling.in sugar and nutrient physiology
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network