Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT3G18500
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G18500 | 1 |  |
| Tree-based ortholog | AT3G18500 | 1 | ||
| Anchor point | AT1G73875 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G18500 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00005G02470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00005G02470 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL3G20040 | 1 | |
| Tree-based ortholog | 1-to-1 | AL3G20040 | 1 | ||
| Anchor point | 1-to-many | AL3G20040 AL2G22760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G20040 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV5G05320 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G05320 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR05G25150 | 1 | |
| Tree-based ortholog | 1-to-1 | BR05G25150 | 1 | ||
| Anchor point | 1-to-many | BR05G25150 BR07G29620 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G25150 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G17480 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_003G17480 | 1 | ||
| Anchor point | 1-to-1 | CRU_003G17480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G17480 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00013G00270 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00013G00270 | 1 | ||
| Anchor point | 1-to-many | CP00003G05090 CP00013G00270 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00013G00270 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR11G03610 | 1 | |
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL06G15500 | 1 | |
| Tree-based ortholog | 1-to-1 | CL06G15500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G15500 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00035G00550 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00035G00550 | 1 | ||
| Anchor point | 1-to-1 | CS00035G00550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00090G00030 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00030G02230 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00030G02230 | 1 | ||
| Anchor point | 1-to-1 | CM00030G02230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00030G02230 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0011G22250 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0011G22250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G22250 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV5G10640 | 1 | |
| Tree-based ortholog | 1-to-1 | FV5G10640 | 1 | ||
| Anchor point | 1-to-1 | FV5G10640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G10640 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM05G35240 GM08G04481 | 2 | |
| Tree-based ortholog | 1-to-many | GM08G04481 GM05G35240 | 2 | ||
| Anchor point | 1-to-many | GM08G04481 GM07G10133 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM05G35240 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR07G00700 | 1 | |
| Tree-based ortholog | 1-to-1 | GR07G00700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G00700 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ2G011080 | 1 | |
| Anchor point | 1-to-1 | LJ2G011070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G011080 | 1 | ||
| Malus domestica | Anchor point | 1-to-1 | MD14G020890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD14G020890 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME07762G00460 | 1 | |
| Tree-based ortholog | 1-to-1 | ME07762G00460 | 1 | ||
| Anchor point | 1-to-1 | ME07762G00460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07762G00460 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT8G103870 | 1 | |
| Tree-based ortholog | 1-to-1 | MT8G103870 | 1 | ||
| Anchor point | 1-to-1 | MT8G103870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G103870 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS06G15410 | 1 | |
| Tree-based ortholog | 1-to-1 | OS06G15410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G42490 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL04G01890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL04G01890 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00059G00110 PP00245G00250 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00245G00250 PP00059G00110 | 2 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-1 | PT12G05710 | 1 | |
| Anchor point | 1-to-1 | PT12G05710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT12G05710 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_005G22090 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_005G22090 | 1 | ||
| Anchor point | 1-to-1 | PPE_005G22090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G22090 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30174G03920 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30174G03920 | 1 | ||
| Anchor point | 1-to-1 | RC30174G03920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30174G03920 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL03G119710 | 1 | |
| Tree-based ortholog | 1-to-1 | SL03G119710 | 1 | ||
| Anchor point | 1-to-1 | SL03G119570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G119710 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST03G033230 | 1 | |
| Tree-based ortholog | 1-to-1 | ST03G033230 | 1 | ||
| Anchor point | 1-to-1 | ST03G033090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G033230 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G16590 | 1 | |
| Tree-based ortholog | 1-to-1 | TP3G16590 | 1 | ||
| Anchor point | 1-to-many | TP5G29070 TP3G16590 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G16590 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0003G02850 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0003G02850 | 1 | ||
| Anchor point | 1-to-1 | TC0003G02850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G02850 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV17G05700 | 1 | |
| Tree-based ortholog | 1-to-1 | VV17G05700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G05700 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM09G16400 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM09G16400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G16400 | 1 |