PLAZA 3.0 Dicots gene overview : AT3G18500

Gene: AT3G18500 (Arabidopsis thaliana)

Overview

Gene Identifier: AT3G18500
Transcript Identifier: AT3G18500.3
Gene Type: Coding gene
Location: 3 : 6352544-6355297 : positive

Family

Gene family: HOM03D001968
(86 genes in 31 species)
specific family
Subfamily: ORTHO03D011179
(24 genes in 23 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description: DNAse I-like superfamily protein

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Identifiers

Identifier	Name
uniprot	Q9LS39

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0000023	RCA	Gene Ontology	maltose metabolic process	1
GO:0019252	RCA	Gene Ontology	starch biosynthetic process	1
GO:0090305	IEA	UniProt	nucleic acid phosphodiester bond hydrolysis	1 2 3
GO:0006355	IEA	UniProt	regulation of transcription, DNA-dependent	1 2 3
GO:0006351	IEA	UniProt	transcription, DNA-templated	1 2 3

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0046872	IEA	UniProt	metal ion binding	1 2 3
GO:0004535	IEA	UniProt	poly(A)-specific ribonuclease activity	1 2 3
GO:0003723	IEA	UniProt	RNA binding	1 2 3

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	IEA, ISM	UniProt	nucleus	1 2 3 4
GO:0005737	IEA	UniProt	cytoplasm	1 2 3

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR005135	Endonuclease/exonuclease/phosphatase

Mapman id	Description
35.1	not assigned.no ontology

No SignalP domains detected for this gene.