Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT2G20610
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT2G20610 AT4G28410 AT4G28420 | 3 |  |
| Tree-based ortholog | AT2G20610 | 1 | ||
| Anchor point | AT4G28410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT2G20610 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00389G00030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00127G00100 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G41510 AL7G13410 | 2 | |
| Tree-based ortholog | 1-to-1 | AL3G41510 | 1 | ||
| Anchor point | 1-to-many | AL3G41510 AL7G13410 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G41510 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV5G18200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G18200 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR03G23960 BR09G42940 | 2 | |
| Tree-based ortholog | 1-to-many | BR07G00190 BR09G10380 | 2 | ||
| Anchor point | 1-to-many | BR03G50320 BR01G08700 BR07G00190 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G00190 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_007G11560 CRU_007G11570 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_003G33750 | 1 | ||
| Anchor point | 1-to-many | CRU_007G11560 CRU_003G33750 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G33750 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00083G00820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00083G00820 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR01G10300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G11860 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL02G17970 | 1 | |
| Anchor point | 1-to-1 | CL02G17950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G11730 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-many | CS00536G00110 CS00536G00090 CS00536G00080 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS04685G00010 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00020G01340 | 1 | |
| Anchor point | 1-to-1 | CM00020G01340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00081G00230 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0001G15260 EG0001G15290 EG0001G15320 ... | 4 | |
| Anchor point | 1-to-1 | EG0001G15210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0001G15290 EG0001G15320 EG0001G15260 | 3 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV6G21830 | 1 | |
| Anchor point | 1-to-1 | FV6G21820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G21820 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM13G37071 GM12G33350 GM13G37080 | 3 | |
| Anchor point | 1-to-many | GM12G33350 GM13G37071 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM06G35585 | 1 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR13G07590 GR05G20010 GR05G19990 | 3 | |
| Anchor point | 1-to-1 | GR05G19990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR05G19990 GR05G20010 | 2 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ3G004940 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G004940 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-1 | MD00G223910 | 1 | |
| Anchor point | 1-to-1 | MD17G017680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD17G017680 | 1 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME02307G00300 | 1 | |
| Anchor point | 1-to-1 | ME02307G00300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02307G00310 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT2G090615 | 1 | |
| Anchor point | 1-to-1 | MT2G090615 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G061360 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS11G35040 OS02G19924 OS02G20360 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS11G35040 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL01G04610 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G04610 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00121G00630 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00121G00630 | 1 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-1 | PT01G28830 | 1 | |
| Anchor point | 1-to-many | PT07G13780 PT17G01380 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT17G01410 PT17G01380 PT17G01400 ... | 4 | ||
| Prunus persica | Tree-based ortholog | 1-to-many | PPE_009G01260 PPE_009G01280 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_009G01260 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29983G00430 | 1 | |
| Anchor point | 1-to-1 | RC29983G00420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29983G00430 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL07G053710 SL10G008200 | 2 | |
| Anchor point | 1-to-many | SL07G053710 SL10G008200 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G053720 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST07G021530 ST10G008680 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G008680 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP3G33870 | 1 | |
| Tree-based ortholog | 1-to-1 | TP3G33870 | 1 | ||
| Anchor point | 1-to-many | TP3G33850 TP7G26390 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G33870 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0002G17950 | 1 | |
| Anchor point | 1-to-1 | TC0002G17890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G17890 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV12G01900 VV12G01930 VV12G01870 ... | 8 | |
| Anchor point | 1-to-1 | VV12G01940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G01940 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM02G43340 ZM04G34220 ZM04G35520 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G34220 | 1 |