Gene: AT2G20610 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G20610
Transcript Identifier
AT2G20610.1
Gene Type
Coding gene
Location
2 : 8878150-8880298 : negative

Family

Gene family
HOM03D000833
(170 genes in 31 species)
specific family
Subfamily
ORTHO03D016608
(10 genes in 5 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Tyrosine transaminase family protein
Curated Summary
Confers auxin overproduction. Mutants have an over-proliferation of lateral roots. Encodes a C-S lyase involved in converting S-alkylthiohydroximate to thiohydroximate in glucosinolate biosynthesis.
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Identifiers

Identifier Name
aliasHOOKLESS 3
aliasROOTY
aliasSUR1
aliasABERRANT LATERAL ROOT FORMATION 1
aliasRTY
aliasRTY1
aliasALF1
aliasSUPERROOT 1
aliasROOTY 1
aliasHLS3
uniprotQ9SIV0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0019761IMP, RCA, UniProtglucosinolate biosynthetic process1 2 3 4 5 6 7 8 9 10
GO:0001560IMPUniProtregulation of cell growth by extracellular stimulus1 2 3 4 5 6 7 8 9
GO:0048830TASUniProtadventitious root development1 2 3 4 5 6 7 8 9
GO:0000096RCAGene Ontologysulfur amino acid metabolic process1
GO:0006098RCAGene Ontologypentose-phosphate shunt1
GO:0006520IEA, RCAUniProtcellular amino acid metabolic process1 2 3 4 5 6 7 8 9
GO:0006546RCAGene Ontologyglycine catabolic process1
GO:0006569RCAGene Ontologytryptophan catabolic process1
GO:0006636RCAGene Ontologyunsaturated fatty acid biosynthetic process1
GO:0006733RCAGene Ontologyoxidoreduction coenzyme metabolic process1
GO:0006766RCAGene Ontologyvitamin metabolic process1
GO:0008652RCAGene Ontologycellular amino acid biosynthetic process1
GO:0009072RCAGene Ontologyaromatic amino acid family metabolic process1
GO:0009106RCAGene Ontologylipoate metabolic process1
GO:0009108RCAGene Ontologycoenzyme biosynthetic process1
GO:0009117RCAGene Ontologynucleotide metabolic process1
GO:0009684IMP, RCA, UniProtindoleacetic acid biosynthetic process1 2 3 4 5 6 7 8 9 10
GO:0009695RCAGene Ontologyjasmonic acid biosynthetic process1
GO:0019252RCAGene Ontologystarch biosynthetic process1
GO:0019288RCAGene Ontologyisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1
GO:0019344RCAGene Ontologycysteine biosynthetic process1
GO:0019748RCAGene Ontologysecondary metabolic process1
GO:0019760RCAGene Ontologyglucosinolate metabolic process1
GO:0042742RCAGene Ontologydefense response to bacterium1
GO:0044272RCAGene Ontologysulfur compound biosynthetic process1
GO:0009058IEAInterProbiosynthetic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008483IEA, ISSUniProttransaminase activity1 2 3 4 5 6 7 8 9
GO:0016846IDAGene Ontologycarbon-sulfur lyase activity1
GO:0080108IMPUniProtS-alkylthiohydroximate lyase activity1 2 3 4 5 6 7 8 9
GO:0030170IEAUniProtpyridoxal phosphate binding1 2 3 4 5 6 7 8
GO:0003824IEAInterProcatalytic activity
GO:0016769IEAPLAZA Homologytransferase activity, transferring nitrogenous groupsHOM03D000833

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISMGene Ontologycytoplasm1
GO:0016020IDAUniProtmembrane1 2 3 4 5 6 7 8 9

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR004839Aminotransferase, class I/classII
IPR005958Tyrosine/nicotianamine aminotransferase
IPR015424Pyridoxal phosphate-dependent transferase

Mapman id Description
13.2.6.2amino acid metabolism.degradation.aromatic aa.tyrosine
16.5.1.1.4.2secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.alkylthiohydroximate C-S lyase
No SignalP domains detected for this gene.