Integrative Orthology Viewer: AT1G05180 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G05180 AT2G32410 | 2 | |
Tree-based ortholog | AT1G05180 | 1 | ||
Anchor point | AT2G32410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G05180 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00037G00840 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00037G00840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00037G00840 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G04660 AL4G17460 | 2 | |
Tree-based ortholog | 1-to-1 | AL1G04660 | 1 | ||
Anchor point | 1-to-many | AL4G17460 AL1G04660 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G04660 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV8G13350 BV8G13360 | 2 | |
Tree-based ortholog | 1-to-1 | BV8G13360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G13350 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR05G11770 BR09G53240 BR10G02550 | 3 | |
Tree-based ortholog | 1-to-1 | BR08G11510 | 1 | ||
Anchor point | 1-to-many | BR10G02550 BR05G11770 BR09G53240 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G02550 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G04120 CRU_004G13330 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_001G04120 | 1 | ||
Anchor point | 1-to-many | CRU_001G04120 CRU_004G13330 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G04120 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00087G00700 | 1 | |
Tree-based ortholog | 1-to-1 | CP00087G00700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00087G00700 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR01G00550 | 1 | |
Tree-based ortholog | 1-to-1 | CR01G00550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G00550 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL02G08550 CL02G08560 | 2 | |
Tree-based ortholog | 1-to-many | CL02G08550 CL02G08560 | 2 | ||
Anchor point | 1-to-1 | CL02G08550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G08560 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00121G00090 | 1 | |
Tree-based ortholog | 1-to-1 | CS00121G00090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00121G00090 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00037G00850 | 1 | |
Tree-based ortholog | 1-to-1 | CM00037G00850 | 1 | ||
Anchor point | 1-to-1 | CM00037G00850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00037G00850 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0001G09100 | 1 | |
Tree-based ortholog | 1-to-many | EG0001G09070 EG0001G09100 | 2 | ||
Anchor point | 1-to-1 | EG0001G09070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G09100 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV1G16550 | 1 | |
Tree-based ortholog | 1-to-1 | FV1G16550 | 1 | ||
Anchor point | 1-to-1 | FV1G16550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G16550 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM06G46210 GM12G10540 | 2 | |
Tree-based ortholog | 1-to-many | GM06G46210 GM12G10540 | 2 | ||
Anchor point | 1-to-many | GM12G10540 GM06G46210 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G10540 GM06G46210 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR05G14960 | 1 | |
Tree-based ortholog | 1-to-1 | GR05G14960 | 1 | ||
Anchor point | 1-to-1 | GR05G14960 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G14960 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G041780 | 1 | |
Tree-based ortholog | 1-to-1 | LJ3G041780 | 1 | ||
Anchor point | 1-to-1 | LJ3G041780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G041780 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G017430 MD09G007770 MD17G008450 | 3 | |
Tree-based ortholog | 1-to-many | MD00G385780 MD00G017430 MD09G007770 | 3 | ||
Anchor point | 1-to-many | MD17G008450 MD09G007770 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD09G007770 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME05214G00010 | 1 | |
Tree-based ortholog | 1-to-1 | ME05214G00010 | 1 | ||
Anchor point | 1-to-1 | ME05214G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME05214G00010 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT4G048220 | 1 | |
Tree-based ortholog | 1-to-1 | MT4G048220 | 1 | ||
Anchor point | 1-to-1 | MT4G048220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G048220 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G60550 | 1 | |
Tree-based ortholog | 1-to-1 | OS03G60550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G60550 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL01G00780 | 1 | |
Tree-based ortholog | 1-to-1 | OL01G00780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G00780 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00079G01450 PP00084G01400 | 2 | |
Tree-based ortholog | 1-to-many | PP00084G01400 PP00079G01450 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00084G01400 PP00079G01450 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT02G22910 PT14G15350 | 2 | |
Tree-based ortholog | 1-to-many | PT02G22910 PT14G15350 | 2 | ||
Anchor point | 1-to-many | PT02G22910 PT14G15350 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G22910 PT14G15350 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_003G19690 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_003G19690 | 1 | ||
Anchor point | 1-to-1 | PPE_003G19690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G19690 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29600G00180 | 1 | |
Tree-based ortholog | 1-to-1 | RC29600G00180 | 1 | ||
Anchor point | 1-to-1 | RC29600G00180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29600G00180 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL11G072460 SL12G005870 | 2 | |
Tree-based ortholog | 1-to-many | SL12G005870 SL11G072460 | 2 | ||
Anchor point | 1-to-1 | SL12G005870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G072460 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST11G029230 ST12G011880 | 2 | |
Tree-based ortholog | 1-to-many | ST12G011880 ST11G029230 | 2 | ||
Anchor point | 1-to-1 | ST12G011880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G029230 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G04030 TP4G14780 | 2 | |
Tree-based ortholog | 1-to-1 | TP1G04030 | 1 | ||
Anchor point | 1-to-many | TP1G04030 TP4G14780 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G04030 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G31450 | 1 | |
Tree-based ortholog | 1-to-1 | TC0002G31450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G31450 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV12G10750 | 1 | |
Tree-based ortholog | 1-to-1 | VV12G10750 | 1 | ||
Anchor point | 1-to-1 | VV12G10750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G10750 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G57810 ZM05G01570 | 2 | |
Tree-based ortholog | 1-to-many | ZM01G57810 ZM05G01570 ZM06G20870 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G57810 ZM05G01570 | 2 |