Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT1G01060
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G01060 | 1 |  |
| Tree-based ortholog | AT1G01060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G01060 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00001G05020 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00001G05020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00001G05020 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-many | AL1G01310 AL4G35000 | 2 | |
| Tree-based ortholog | 1-to-1 | AL1G01310 | 1 | ||
| Anchor point | N/A | AL1G01310 AL4G35000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G01310 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV1G04010 | 1 | |
| Tree-based ortholog | 1-to-1 | BV1G04010 | 1 | ||
| Anchor point | N/A | BV1G04010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G04010 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR05G00950 BR08G32090 BR10G05860 | 3 | |
| Tree-based ortholog | 1-to-1 | BR10G05860 | 1 | ||
| Anchor point | N/A | BR10G05860 BR05G00950 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G05860 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-many | CRU_001G01050 CRU_004G28450 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_001G01050 | 1 | ||
| Anchor point | N/A | CRU_001G01050 CRU_004G28450 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G01050 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00057G00750 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00057G00750 | 1 | ||
| Anchor point | N/A | CP00057G00750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00057G00750 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR06G05950 CR12G06800 | 2 | |
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL06G03390 | 1 | |
| Tree-based ortholog | 1-to-1 | CL06G03390 | 1 | ||
| Anchor point | N/A | CL06G03390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G03390 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00001G05170 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00001G05170 | 1 | ||
| Anchor point | N/A | CS00001G05170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00001G05170 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00052G00790 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00052G00790 | 1 | ||
| Anchor point | N/A | CM00052G00790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00052G00790 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0004G22150 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0004G22150 | 1 | ||
| Anchor point | N/A | EG0004G22150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G22150 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV7G04140 | 1 | |
| Tree-based ortholog | 1-to-1 | FV7G04140 | 1 | ||
| Anchor point | N/A | FV7G04140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G04140 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM03G42260 GM07G05410 GM16G01980 ... | 4 | |
| Tree-based ortholog | 1-to-many | GM16G01980 GM07G05410 GM19G45030 ... | 4 | ||
| Anchor point | N/A | GM03G42260 GM19G45030 GM16G01980 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM03G42260 GM19G45030 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR07G11390 GR08G13180 GR08G13200 | 3 | |
| Tree-based ortholog | 1-to-many | GR08G13180 GR08G13200 GR07G11390 | 3 | ||
| Anchor point | N/A | GR07G11390 GR08G13180 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR08G13200 GR08G13180 | 2 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G008560 | 1 | |
| Malus domestica | Orthologous gene family | 1-to-1 | MD00G245970 | 1 | |
| Tree-based ortholog | 1-to-many | MD00G323500 MD00G323460 MD00G245970 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G245970 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME03581G00090 ME07571G00180 | 2 | |
| Tree-based ortholog | 1-to-many | ME03581G00090 ME07571G00180 | 2 | ||
| Anchor point | N/A | ME07571G00180 ME03581G00090 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME07571G00180 ME03581G00090 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT7G118330 | 1 | |
| Tree-based ortholog | 1-to-1 | MT7G118330 | 1 | ||
| Anchor point | N/A | MT7G118330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G118330 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS08G06110 | 1 | |
| Tree-based ortholog | 1-to-1 | OS08G06110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G06110 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL06G02290 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00325G00330 PP00096G00790 | 2 | |
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT02G18080 PT14G10680 | 2 | |
| Tree-based ortholog | 1-to-many | PT02G18080 PT14G10680 | 2 | ||
| Anchor point | N/A | PT14G10680 PT02G18080 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT14G10680 PT02G18080 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_002G19360 | 1 | |
| Tree-based ortholog | 1-to-many | PPE_002G19350 PPE_002G19360 | 2 | ||
| Anchor point | N/A | PPE_002G19350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G19360 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC30076G00280 | 1 | |
| Anchor point | N/A | RC30076G00280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30076G00280 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL10G005080 | 1 | |
| Tree-based ortholog | 1-to-1 | SL10G005080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G005080 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST10G006580 | 1 | |
| Tree-based ortholog | 1-to-1 | ST10G006580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G006580 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-many | TP1G01250 TP4G28860 | 2 | |
| Tree-based ortholog | 1-to-1 | TP1G01250 | 1 | ||
| Anchor point | N/A | TP4G28860 TP1G01250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G01250 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0001G33000 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0001G33000 | 1 | ||
| Anchor point | N/A | TC0001G33000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G33000 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV15G07580 | 1 | |
| Tree-based ortholog | 1-to-1 | VV15G07580 | 1 | ||
| Anchor point | N/A | VV15G07580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV15G07580 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM04G07500 ZM10G10150 | 2 | |
| Tree-based ortholog | 1-to-many | ZM04G07500 ZM10G10150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM04G07500 ZM10G10150 | 2 |