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Integrative Orthology Viewer:
AL1G20180
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL0G07350 AL1G08720 AL1G20180 ... | 11 |  |
| Tree-based ortholog | AL1G20180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL1G20180 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00007G03310 ATR_00016G02960 ATR_00023G01150 ... | 4 | |
| Tree-based ortholog | 1-to-1 | ATR_00007G03310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00007G03310 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G09090 AT1G19230 AT1G64060 ... | 10 | |
| Tree-based ortholog | 1-to-1 | AT1G19230 | 1 | ||
| Anchor point | N/A | AT1G19230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G19230 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV4G09350 BV5G06800 BV7G07390 ... | 4 | |
| Tree-based ortholog | 1-to-1 | BV8G14550 | 1 | ||
| Anchor point | N/A | BV8G14550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G14550 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G11830 BR02G27150 BR02G34590 ... | 13 | |
| Tree-based ortholog | 1-to-many | BR09G45750 BR06G13780 | 2 | ||
| Anchor point | N/A | BR09G45750 BR06G13780 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR09G45750 BR06G13780 | 2 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G08000 CRU_001G18030 CRU_002G00800 ... | 10 | |
| Tree-based ortholog | 1-to-1 | CRU_001G18030 | 1 | ||
| Anchor point | N/A | CRU_001G18030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G18030 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00013G01910 CP00038G00470 CP00048G00840 ... | 9 | |
| Tree-based ortholog | 1-to-1 | CP00082G00650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00201G00010 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR03G10280 CR03G10260 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR03G10260 CR03G10280 | 2 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL01G02130 CL02G20690 CL06G16210 ... | 5 | |
| Tree-based ortholog | 1-to-1 | CL11G18880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G18880 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00009G01550 CS00013G01980 CS00014G01290 ... | 7 | |
| Tree-based ortholog | 1-to-many | CS00013G01980 CS01022G00050 | 2 | ||
| Anchor point | N/A | CS00013G01980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00013G01980 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00005G06920 CM00005G06930 CM00025G00920 ... | 7 | |
| Tree-based ortholog | 1-to-1 | CM00056G00470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00025G00920 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0003G06280 EG0005G06630 EG0006G20400 ... | 7 | |
| Tree-based ortholog | 1-to-1 | EG0003G06280 | 1 | ||
| Anchor point | N/A | EG0003G06280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0003G06280 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV0G32610 FV1G10900 FV5G03740 ... | 6 | |
| Tree-based ortholog | 1-to-1 | FV1G10900 | 1 | ||
| Anchor point | N/A | FV1G10900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G10900 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM01G43190 GM03G39610 GM04G38040 ... | 19 | |
| Tree-based ortholog | 1-to-many | GM15G20090 GM15G20120 GM09G08470 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM15G20120 GM09G08470 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G01740 GR01G05330 GR01G10650 ... | 13 | |
| Tree-based ortholog | 1-to-1 | GR01G01740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G01740 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G020110 LJ1G045790 LJ4G044660 ... | 9 | |
| Tree-based ortholog | 1-to-1 | LJ6G015400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G015400 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G387530 MD01G008660 MD02G027650 ... | 13 | |
| Tree-based ortholog | 1-to-many | MD15G015830 MD15G021590 | 2 | ||
| Anchor point | N/A | MD15G015830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD15G015830 MD15G021590 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME00506G00270 ME00620G00120 ME01701G00960 ... | 9 | |
| Tree-based ortholog | 1-to-1 | ME10493G00130 | 1 | ||
| Anchor point | N/A | ME10493G00130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME10493G00130 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G083290 MT2G043900 MT3G098320 ... | 10 | |
| Tree-based ortholog | 1-to-1 | MT2G043900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G043900 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G25820 OS01G53294 OS01G61880 ... | 9 | |
| Tree-based ortholog | 1-to-many | OS08G35210 OS09G26660 | 2 | ||
| Anchor point | N/A | OS09G26660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G45210 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL16G00340 | 1 | |
| Tree-based ortholog | 1-to-1 | OL16G00340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL16G00340 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00010G00120 PP00018G00970 PP00032G00240 ... | 4 | |
| Tree-based ortholog | 1-to-many | PP00032G00240 PP00241G00210 PP00010G00120 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00241G00210 PP00010G00120 PP00032G00240 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G07090 PT01G09830 PT03G13330 ... | 10 | |
| Tree-based ortholog | 1-to-1 | PT06G13730 | 1 | ||
| Anchor point | N/A | PT06G13730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT06G13730 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G21860 PPE_005G14600 PPE_005G20830 ... | 6 | |
| Tree-based ortholog | 1-to-1 | PPE_007G21290 | 1 | ||
| Anchor point | N/A | PPE_007G21290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G21290 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29739G01400 RC29941G00030 RC30039G00130 ... | 7 | |
| Tree-based ortholog | 1-to-1 | RC29739G01400 | 1 | ||
| Anchor point | N/A | RC29739G01400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29739G01400 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G099620 SL03G117980 SL05G025680 ... | 8 | |
| Tree-based ortholog | 1-to-many | SL05G025680 SL07G042460 SL05G025690 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G042460 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST01G037380 ST03G031420 ST05G016960 ... | 9 | |
| Tree-based ortholog | 1-to-many | ST05G016960 ST07G016200 | 2 | ||
| Anchor point | N/A | ST07G016200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G016200 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G07690 TP1G17140 TP2G00650 ... | 10 | |
| Tree-based ortholog | 1-to-1 | TP1G17140 | 1 | ||
| Anchor point | N/A | TP1G17140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G17140 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0003G10510 TC0003G14530 TC0003G28290 ... | 7 | |
| Tree-based ortholog | 1-to-1 | TC0009G06770 | 1 | ||
| Anchor point | N/A | TC0009G06770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G06770 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV01G01480 VV01G01490 VV02G03780 ... | 7 | |
| Tree-based ortholog | 1-to-1 | VV11G02090 | 1 | ||
| Anchor point | N/A | VV11G02090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV11G02090 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G20940 ZM01G37420 ZM02G42940 ... | 16 | |
| Tree-based ortholog | 1-to-many | ZM01G37420 ZM07G15140 ZM07G15130 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G37420 | 1 |